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cg2_3.0_scaffold_4134_c

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_4134_c_1
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists


197..769
DNA (573bp) protein (191aa)
50S ribosomal protein L5 n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C6I9_9CREN rbh
rpl5p; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=CG_CPArch01-01
rpl5p; 50S ribosomal protein L5
cg2_3.0_scaffold_4134_c_2
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(989..9748)
DNA (8760bp) protein (2920aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PVJ4_9EURY rbh
adhesin-like protein Tax=CG_CPArch01-01
adhesin-like protein
cg2_3.0_scaffold_4134_c_3
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

9840..10154
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES43_AMOA5 rbh
hypothetical protein; K03671 thioredoxin 1 Tax=CG_CPArch01-01
hypothetical protein
cg2_3.0_scaffold_4134_c_4
unknown

Not on your lists

10222..10317
DNA (96bp) protein (32aa)

This feature has no annotations

cg2_3.0_scaffold_4134_c_5
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

10298..11251
DNA (954bp) protein (318aa)
Replication factor C small subunit n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9F9_9EURY rbh
rfcS; Replication factor C, small subunit (rfcS); K04801 replication factor C small subunit Tax=CG_CPArch01-01
rfcS; replication factor C small subunit
cg2_3.0_scaffold_4134_c_6
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(11431..11739)
DNA (309bp) protein (103aa)
Chromosomal protein MC1c n=2 Tax=Methanosaeta concilii RepID=HMC1C_METCN rbh
hypothetical protein Tax=CG_CPArch01-01
hypothetical protein
cg2_3.0_scaffold_4134_c_7
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists


12187..12495
DNA (309bp) protein (103aa)
rps10p; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=CG_CPArch01-01
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
rps10p; 30S ribosomal protein S10
cg2_3.0_scaffold_4134_c_trna_1
unknown

Not on your lists

12618..12699
DNA (82bp)
transferRNA
cg2_3.0_scaffold_4134_c_trna_2
unknown

Not on your lists

12757..12828
DNA (72bp)
transferRNA
cg2_3.0_scaffold_4134_c_trna_3
unknown

Not on your lists

12842..12914
DNA (73bp)
transferRNA
cg2_3.0_scaffold_4134_c_8
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

12997..13257
DNA (261bp) protein (87aa)
hypothetical protein Tax=CG_CPArch01-01
hypothetical protein
cg2_3.0_scaffold_4134_c_9
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(13584..14024)
DNA (441bp) protein (147aa)
Tax=CG_CPArch01-01
cg2_3.0_scaffold_4134_c_10
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(14143..15600)
DNA (1458bp) protein (486aa)
tfb; Transcription initiation factor TFIIB; K03124 transcription initiation factor TFIIB Tax=CG_CPArch01-01
tfb; transcription initiation factor TFIIB
cg2_3.0_scaffold_4134_c_11
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(15605..15976)
DNA (372bp) protein (124aa)
hypothetical protein Tax=CG_CPArch01-01
hypothetical protein
cg2_3.0_scaffold_4134_c_12
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

16561..17232
DNA (672bp) protein (224aa)
ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_CPArch01-01
Ribonuclease HII n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S4B9_METSF rbh
ribonuclease HII
cg2_3.0_scaffold_4134_c_13
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

17363..18730
DNA (1368bp) protein (456aa)
NEQ059 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MH7_NANEQ rbh
ATPase; K06865 ATPase Tax=CG_CPArch01-01
ATPase
cg2_3.0_scaffold_4134_c_14
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(18771..19007)
DNA (237bp) protein (79aa)
Tax=CG_CPArch01-01
cg2_3.0_scaffold_4134_c_15
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(19004..19360)
DNA (357bp) protein (119aa)
Tax=CG_CPArch01-01
cg2_3.0_scaffold_4134_c_16
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(19492..20829)
DNA (1338bp) protein (446aa)
Tax=CG_CPArch01-01
cg2_3.0_scaffold_4134_c_17
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

20997..22673
DNA (1677bp) protein (559aa)
ATP-dependent DNA ligase (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Tax=CG_CPArch01-01
Probable thermostable DNA ligase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=DNLI_PYRHO rbh
DNA ligase
cg2_3.0_scaffold_4134_c_18
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(22657..23940)
DNA (1284bp) protein (428aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ rbh
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_CPArch01-01
Cell division protein FtsZ
cg2_3.0_scaffold_4134_c_19
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

23976..24197
DNA (222bp) protein (74aa)
small nuclear ribonucleoprotein; K04796 small nuclear ribonucleoprotein Tax=CG_CPArch01-01
hypothetical protein
cg2_3.0_scaffold_4134_c_20
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

24194..24379
DNA (186bp) protein (62aa)
50S ribosomal protein L37e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXZ6_METFV rbh
LSU ribosomal protein l37e; K02922 large subunit ribosomal protein L37e Tax=CG_CPArch01-01
50S ribosomal protein L37e
cg2_3.0_scaffold_4134_c_21
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(24508..25032)
DNA (525bp) protein (175aa)
NUDIX hydrolase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QNR0_METMZ rbh
hypothetical protein Tax=CG_CPArch01-01
NUDIX hydrolase
cg2_3.0_scaffold_4134_c_22
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

25103..26065
DNA (963bp) protein (321aa)
Wyosine base formation domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWM7_METFV rbh
wyosine base formation domain-containing protein Tax=CG_CPArch01-01
wyosine base formation domain-containing protein
cg2_3.0_scaffold_4134_c_23
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(26288..26629)
DNA (342bp) protein (114aa)
G-protein-signaling modulator 2 Tax=CG_CPArch01-01
TPR repeat-containing protein
cg2_3.0_scaffold_4134_c_24
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(26592..27032)
DNA (441bp) protein (147aa)
Uncharacterized protein (Fragment) n=1 Tax=Microcystis aeruginosa DIANCHI905 RepID=L8NLK7_MICAE
tetratricopeptide protein Tax=Altiarchaeum hamiconexum
G-protein-signaling modulator 2
cg2_3.0_scaffold_4134_c_25
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(27280..30705)
DNA (3426bp) protein (1142aa)
DNA-directed RNA polymerase, subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=CG_CPArch01-01
DNA-directed RNA polymerase, subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA57_METMS rbh
cg2_3.0_scaffold_4134_c_26
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(30702..33935)
DNA (3234bp) protein (1078aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=CG_CPArch01-01
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000382AA61 rbh
cg2_3.0_scaffold_4134_c_27
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(33976..34221)
DNA (246bp) protein (82aa)
RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=CG_CPArch01-01
DNA-directed RNA polymerase subunit H n=1 Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH rbh
RNA polymerase subunit H
Displaying items 1-30 of 31 in total

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