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cg2_3.0_scaffold_2089_c

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2089_c_1
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

86..331
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RWS4_FERPA rbh
hypothetical protein; K09728 hypothetical protein Tax=CG_CPArch01-01
hypothetical protein
cg2_3.0_scaffold_2089_c_2
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(321..1901)
DNA (1581bp) protein (527aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28241_ARCFU rbh
hypothetical protein Tax=CG_CPArch01-01
RNA-binding protein homologous to eukaryotic snRNP
cg2_3.0_scaffold_2089_c_3
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(1888..2052)
DNA (165bp) protein (55aa)
Tax=CG_CPArch01-01
cg2_3.0_scaffold_2089_c_4
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(2049..2720)
DNA (672bp) protein (224aa)
DNA repair and recombination protein RadB n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TA16_METSL rbh
DNA repair and recombination protein radB; K04484 DNA repair protein RadB Tax=CG_CPArch01-01
DNA repair and recombination protein radB
cg2_3.0_scaffold_2089_c_5
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists


2767..3219
DNA (453bp) protein (151aa)
Transcription elongation factor Spt5 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29713_ARCFU rbh
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=CG_CPArch01-01
ribosomal protein L24p/L26e, archaeal
cg2_3.0_scaffold_2089_c_6
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(3512..3826)
DNA (315bp) protein (105aa)
30S ribosomal protein S27ae n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLG1_THEBM rbh
30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae Tax=CG_CPArch01-01
30S ribosomal protein S27Ae
cg2_3.0_scaffold_2089_c_7
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(3934..4710)
DNA (777bp) protein (259aa)
ribosomal RNA-processing protein rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 Tax=CG_CPArch01-01
Ribosomal RNA-processing protein RRP42 id=5800801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
Ribosomal RNA-processing protein RRP42
cg2_3.0_scaffold_2089_c_8
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(4710..5438)
DNA (729bp) protein (243aa)
Exosome complex component Rrp41 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HIK5_PYRSN rbh
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=CG_CPArch01-01
exosome complex exonuclease Rrp41
cg2_3.0_scaffold_2089_c_9
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(5441..6244)
DNA (804bp) protein (268aa)
ribosomal RNA-processing protein rrp4 (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=CG_CPArch01-01
ribosomal RNA-processing protein rrp4 (EC:3.1.13.-)
Exosome complex component Rrp4 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=RRP4_METFV rbh
cg2_3.0_scaffold_2089_c_10
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists


comp(6400..7800)
DNA (1401bp) protein (467aa)
CCA-adding enzyme; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=CG_CPArch01-01
CCA-adding enzyme n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BA64_METIK rbh
CCA-adding enzyme
cg2_3.0_scaffold_2089_c_11
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists


7830..8420
DNA (591bp) protein (197aa)
30S ribosomal protein S3Ae n=1 Tax=nanoarchaeote Nst1 RepID=R1E4Q5_9ARCH rbh
30S ribosomal protein S3Ae; K02984 small subunit ribosomal protein S3Ae Tax=CG_CPArch01-01
30S ribosomal protein S3Ae
cg2_3.0_scaffold_2089_c_12
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

8451..9125
DNA (675bp) protein (225aa)
Tax=CG_CPArch01-01
cg2_3.0_scaffold_2089_c_13
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

9288..10016
DNA (729bp) protein (243aa)
Histidine triad (HIT) protein n=1 Tax=Bacillus macauensis ZFHKF-1 RepID=I8UG87_9BACI rbh
diadenosine tetraphosphate hydrolase Tax=CG_CPArch01-01
diadenosine tetraphosphate hydrolase
cg2_3.0_scaffold_2089_c_14
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

10018..10878
DNA (861bp) protein (287aa)
MEMO1 family protein Dehly_0349 n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3Z9_DEHLB rbh
hypothetical protein; K06990 Tax=CG_CPArch01-01
hypothetical protein
cg2_3.0_scaffold_2089_c_15
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(11289..12386)
DNA (1098bp) protein (366aa)
pepA; glutamyl aminopeptidase PepA (EC:3.4.11.7); K01179 endoglucanase [EC:3.2.1.4] Tax=CG_CPArch01-01
pepA; glutamyl aminopeptidase PepA (EC:3.4.11.7)
Glutamyl aminopeptidase PepA n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E358_METRM rbh
cg2_3.0_scaffold_2089_c_16
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(12467..12709)
DNA (243bp) protein (81aa)
Tax=CG_CPArch01-01
cg2_3.0_scaffold_2089_c_17
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists


12981..14501
DNA (1521bp) protein (507aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_CPArch01-01
Phenylalanyl-tRNA synthetase subunit alpha
cg2_3.0_scaffold_2089_c_18
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists


14545..16224
DNA (1680bp) protein (560aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=CG_CPArch01-01
Phenylalanine-tRNA ligase beta subunit
cg2_3.0_scaffold_2089_c_19
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

16593..17612
DNA (1020bp) protein (340aa)
[pyruvate formate-lyase]-activating enzyme (EC:1.97.1.4); K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=CG_CPArch01-01
[pyruvate formate-lyase]-activating enzyme (EC:1.97.1.4)
[pyruvate formate-lyase]-activating enzyme n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q8X4_SULNB rbh
cg2_3.0_scaffold_2089_c_20
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

17630..18214
DNA (585bp) protein (195aa)
Metal dependent phosphohydrolase n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P865_METFA rbh
metal dependent phosphohydrolase Tax=CG_CPArch01-01
metal dependent phosphohydrolase
cg2_3.0_scaffold_2089_c_21
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(18646..19545)
DNA (900bp) protein (300aa)
Tax=CG_CPArch01-01
cg2_3.0_scaffold_2089_c_trna_1
unknown

Not on your lists

comp(19627..19699)
DNA (73bp)
transferRNA
Displaying 22 items

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