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cg2_3.0_scaffold_54_c

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_54_c_1
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

1..183
DNA (183bp) protein (61aa)
Tax=CG_Bacteroid_02
cg2_3.0_scaffold_54_c_2
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

243..701
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037339B1 rbh
hypothetical protein Tax=CG_Bacteroid_02
cg2_3.0_scaffold_54_c_3
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

1029..5345
DNA (4317bp) protein (1439aa)
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=CG_Bacteroid_02
DNA polymerase III subunit alpha n=1 Tax=Eudoraea adriatica RepID=UPI00035CA281 rbh
DNA polymerase III subunit alpha
cg2_3.0_scaffold_54_c_4
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(5385..6518)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J313_9PORP rbh
lipid A 3-O-deacylase-like protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_54_c_5
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(6595..7647)
DNA (1053bp) protein (351aa)
cpx; cytochrome C peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5] Tax=CG_Bacteroid_02
cytochrome C peroxidase n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B68FF6 rbh
cpx; cytochrome C peroxidase
cg2_3.0_scaffold_54_c_6
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(8066..9247)
DNA (1182bp) protein (394aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=CG_Bacteroid_02
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7J8D5_9PORP rbh
SAM-dependent methyltransferase
cg2_3.0_scaffold_54_c_7
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(9250..10203)
DNA (954bp) protein (318aa)
transglutaminase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003470DC8 rbh
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_54_c_8
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

10305..11006
DNA (702bp) protein (234aa)
Putative uncharacterized protein Tax=CG_Bacteroid_02
cg2_3.0_scaffold_54_c_9
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

11024..13534
DNA (2511bp) protein (837aa)
DNA segregation ATPase, FtsK/SpoIIIE family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPM0_SOLCM rbh
DNA segregation ATPase FtsK Tax=CG_Bacteroid_02
DNA segregation ATPase FtsK
cg2_3.0_scaffold_54_c_10
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

13546..14187
DNA (642bp) protein (214aa)
outer membrane lipoprotein carrier protein LolA Tax=CG_Bacteroid_02
outer membrane lipoprotein carrier protein LolA
cg2_3.0_scaffold_54_c_11
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(14318..15505)
DNA (1188bp) protein (396aa)
succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=CG_Bacteroid_02
succinyl-CoA synthetase subunit beta
cg2_3.0_scaffold_54_c_12
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(15694..16371)
DNA (678bp) protein (226aa)
rluD; pseudouridylate synthase (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=CG_Bacteroid_02
rluD; pseudouridylate synthase (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M361_GRAFK rbh
cg2_3.0_scaffold_54_c_13
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(16405..17271)
DNA (867bp) protein (289aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=CG_Bacteroid_02
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
cg2_3.0_scaffold_54_c_14
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(17449..19467)
DNA (2019bp) protein (673aa)
Outer membrane protein Omp28 n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2A5_OWEHD rbh
Outer membrane protein Omp28 Tax=CG_Bacteroid_02
Outer membrane protein Omp28
cg2_3.0_scaffold_54_c_15
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(19604..21787)
DNA (2184bp) protein (728aa)
xylanase Tax=CG_Bacteroid_02
xylanase
cg2_3.0_scaffold_54_c_16
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(21897..22514)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TP42_MARTH rbh
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_54_c_17
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(22517..23911)
DNA (1395bp) protein (465aa)
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PJC5_MURRD rbh
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=CG_Bacteroid_02
RNA polymerase sigma-54 subunit RpoN
cg2_3.0_scaffold_54_c_18
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(24044..25483)
DNA (1440bp) protein (480aa)
asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=CG_Bacteroid_02
asparaginyl-tRNA synthetase (EC:6.1.1.22)
asparaginyl-tRNA synthetase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002F48FF9 rbh
cg2_3.0_scaffold_54_c_19
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

25877..26425
DNA (549bp) protein (183aa)
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=CG_Bacteroid_02
peptidylprolyl isomerase
cg2_3.0_scaffold_54_c_20
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(26525..28030)
DNA (1506bp) protein (502aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] Tax=CG_Bacteroid_02
glutamine synthetase
cg2_3.0_scaffold_54_c_21
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

28153..29277
DNA (1125bp) protein (375aa)
glycosyltransferase Tax=CG_Bacteroid_02
a-glycosyltransferase
cg2_3.0_scaffold_54_c_trna_1
unknown

Not on your lists

29377..29449
DNA (73bp)
transferRNA
cg2_3.0_scaffold_54_c_22
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(29525..30808)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MV33_9FLAO rbh
thioredoxin-like protein Tax=CG_Bacteroid_02
trxA_3; Thioredoxin
cg2_3.0_scaffold_54_c_23
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(30891..31505)
DNA (615bp) protein (205aa)
gidB; methyltransferase GidB (EC:2.1.-.-); K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=CG_Bacteroid_02
gidB; methyltransferase GidB (EC:2.1.-.-)
Glucose-inhibited division protein/putative methyltransferase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6STD5_9FLAO rbh
cg2_3.0_scaffold_54_c_24
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

31652..32635
DNA (984bp) protein (328aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_54_c_25
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(32637..33512)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3B6_SPHS2 rbh
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_54_c_26
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(33514..34386)
DNA (873bp) protein (291aa)
udp; uridine phosphorylase (EC:2.4.2.3); K00757 uridine phosphorylase [EC:2.4.2.3] Tax=CG_Bacteroid_02
phosphorylase
cg2_3.0_scaffold_54_c_27
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

34469..35347
DNA (879bp) protein (293aa)
universal stress protein UspA-like protein Tax=CG_Bacteroid_02
universal stress protein UspA-like protein
cg2_3.0_scaffold_54_c_28
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

35349..36602
DNA (1254bp) protein (418aa)
competence/damage-inducible protein CinA Tax=CG_Bacteroid_02
damage-inducible protein CinA
cg2_3.0_scaffold_54_c_29
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists


36771..37007
DNA (237bp) protein (79aa)
50S ribosomal protein L28P; K02902 large subunit ribosomal protein L28 Tax=CG_Bacteroid_02
50S ribosomal protein L28
Displaying items 1-30 of 80 in total

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