ggKbase home page

cg2_3.0_scaffold_548_c

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_548_c_1
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(2..175)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Prevotella sp. oral taxon 299 str. F0039 RepID=D3IBZ8_9BACT
transposase Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
cg2_3.0_scaffold_548_c_2
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(263..505)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037096F7 rbh
bifunctional deaminase-reductase domain-containing protein Tax=CG_Bacteroid_02
bifunctional deaminase-reductase domain-containing protein
cg2_3.0_scaffold_548_c_3
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(660..2792)
DNA (2133bp) protein (711aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_548_c_4
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(2927..4738)
DNA (1812bp) protein (604aa)
GTP-binding protein TypA; K06207 GTP-binding protein Tax=CG_Bacteroid_02
GTP-binding protein TypA
cg2_3.0_scaffold_548_c_5
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

4944..6827
DNA (1884bp) protein (628aa)
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup Tax=CG_Bacteroid_02
ABC transporter
cg2_3.0_scaffold_548_c_6
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

6907..8685
DNA (1779bp) protein (593aa)
aconitate hydratase domain-containing protein Tax=CG_Bacteroid_02
aconitate hydratase domain-containing protein
cg2_3.0_scaffold_548_c_7
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

8828..9520
DNA (693bp) protein (231aa)
Tax=CG_Bacteroid_02
cg2_3.0_scaffold_548_c_8
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(9540..12218)
DNA (2679bp) protein (893aa)
id=1841507 Tax=CG_Bacteroid_02
cg2_3.0_scaffold_548_c_9
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(12219..15182)
DNA (2964bp) protein (988aa)
glycoside hydrolase family protein Tax=CG_Bacteroid_02
glycoside hydrolase family protein
cg2_3.0_scaffold_548_c_10
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(15293..15913)
DNA (621bp) protein (207aa)
rhomboid family protein Tax=CG_Bacteroid_02
Rhomboid family membrane protein
cg2_3.0_scaffold_548_c_11
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(15916..16362)
DNA (447bp) protein (149aa)
SsrA-binding protein; K03664 SsrA-binding protein Tax=CG_Bacteroid_02
SsrA-binding protein
cg2_3.0_scaffold_548_c_12
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(16366..16953)
DNA (588bp) protein (196aa)
Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Parabacteroides RepID=A7AGH9_9PORP rbh
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Bacteroid_02
Sua5/YciO/YrdC/YwlC family protein
cg2_3.0_scaffold_548_c_13
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(16946..17950)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037C4951 rbh
ADP-heptose--LPS heptosyltransferase Tax=CG_Bacteroid_02
ADP-heptose--LPS heptosyltransferase
cg2_3.0_scaffold_548_c_14
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(17960..19156)
DNA (1197bp) protein (399aa)
aspC2; aspartate transaminase AspC2 (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=CG_Bacteroid_02
aspC2; aspartate transaminase AspC2 (EC:2.6.1.1)
cg2_3.0_scaffold_548_c_15
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(19257..19652)
DNA (396bp) protein (132aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_548_c_16
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(19671..20144)
DNA (474bp) protein (158aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_548_c_17
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

20323..20511
DNA (189bp) protein (63aa)
Nitrogen fixation protein NifU n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JEX5_DESDE rbh
Fe-S cluster assembly protein NifU; K13819 NifU-like protein Tax=CG_Bacteroid_02
Fe-S cluster assembly protein NifU
cg2_3.0_scaffold_548_c_18
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

20920..21384
DNA (465bp) protein (155aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_548_c_19
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

21546..22790
DNA (1245bp) protein (415aa)
DEAD/DEAH box helicase domain-containing protein; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=CG_Bacteroid_02
ATP-dependent RNA helicase RhlE n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GFE4_9BACT rbh
RNA helicase
cg2_3.0_scaffold_548_c_20
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

22809..23834
DNA (1026bp) protein (342aa)
alcohol dehydrogenase Tax=CG_Bacteroid_02
alcohol dehydrogenase
cg2_3.0_scaffold_548_c_21
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

23899..25686
DNA (1788bp) protein (596aa)
Putative phosphatidylinositol-4-phosphate 5-kinase n=1 Tax=Kordia algicida OT-1 RepID=A9DUR9_9FLAO rbh
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_548_c_22
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

25690..26415
DNA (726bp) protein (242aa)
Glycosyl transferase family 2 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPX3_HALH1 rbh
family 2 glycosyl transferase Tax=CG_Bacteroid_02
family 2 glycosyl transferase
cg2_3.0_scaffold_548_c_23
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

26412..27140
DNA (729bp) protein (243aa)
Methyltransferase type 12 n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GGM7_LACS5 rbh
type 12 methyltransferase Tax=CG_Bacteroid_02
type 12 methyltransferase
cg2_3.0_scaffold_548_c_24
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

27140..28168
DNA (1029bp) protein (343aa)
23S rRNA m(2)a-2503 methyltransferase (EC:2.1.1.-); K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=CG_Bacteroid_02
ribosomal RNA large subunit methyltransferase N
cg2_3.0_scaffold_548_c_25
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(28469..29344)
DNA (876bp) protein (292aa)
id=4064259 Tax=CG_Bacteroid_02
cg2_3.0_scaffold_548_c_26
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

30014..31999
DNA (1986bp) protein (662aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_548_c_27
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

32001..32915
DNA (915bp) protein (305aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_548_c_28
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

32917..33546
DNA (630bp) protein (210aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_548_c_29
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

33551..34975
DNA (1425bp) protein (475aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
cg2_3.0_scaffold_548_c_30
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

34982..36505
DNA (1524bp) protein (508aa)
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy