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cg2_3.0_scaffold_3223_c

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3223_c_1
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

132..1118
DNA (987bp) protein (329aa)
Uncharacterized protein Tax=CG_Saphiro_01
cg2_3.0_scaffold_3223_c_2
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

1271..1822
DNA (552bp) protein (184aa)
spoU; RNA methylase (EC:2.1.1.-); K00599 [EC:2.1.1.-] Tax=CG_Saphiro_01
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=uncultured bacterium RepID=K2C3C0_9BACT rbh
RNA methyltransferase
cg2_3.0_scaffold_3223_c_3
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

1947..3884
DNA (1938bp) protein (646aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=CG_Saphiro_01
DNA topoisomerase IV subunit B (EC:5.99.1.3)
cg2_3.0_scaffold_3223_c_4
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

4363..4929
DNA (567bp) protein (189aa)
hypothetical protein Tax=CG_Saphiro_01
protein of unknown function DUF88 id=92079 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
cg2_3.0_scaffold_3223_c_5
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


5008..7659
DNA (2652bp) protein (884aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=CG_Saphiro_01
DNA gyrase subunit A n=1 Tax=uncultured bacterium RepID=K2E8H5_9BACT rbh
hypothetical protein
cg2_3.0_scaffold_3223_c_6
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(7753..8694)
DNA (942bp) protein (314aa)
Tyrosine recombinase XerC n=1 Tax=uncultured bacterium RepID=K2B7C9_9BACT rbh
putative Tyrosine recombinase xerD Tax=CG_Saphiro_01
Tyrosine recombinase XerD
cg2_3.0_scaffold_3223_c_7
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(9223..10008)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CG03_9BACT rbh
Uncharacterized protein Tax=CG_Saphiro_01
cg2_3.0_scaffold_3223_c_8
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(10008..10691)
DNA (684bp) protein (228aa)
Probable transcriptional regulatory protein HIMB59_00000420 n=1 Tax=alpha proteobacterium HIMB59 RepID=J9YZC2_9PROT rbh
YebC/PmpR family DNA-binding regulatory protein Tax=CG_Saphiro_01
YebC/PmpR family DNA-binding regulatory protein
cg2_3.0_scaffold_3223_c_9
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(10675..11424)
DNA (750bp) protein (250aa)
Tax=CG_Saphiro_01
cg2_3.0_scaffold_3223_c_10
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(11473..12210)
DNA (738bp) protein (246aa)
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=CG_Saphiro_01
Pseudouridine synthase n=1 Tax=uncultured bacterium RepID=K2F3R1_9BACT rbh
rluD; ribosomal large subunit pseudouridine synthase D
cg2_3.0_scaffold_3223_c_11
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(12457..12813)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A4S8_9BACT rbh
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=CG_Saphiro_01
DnaK suppressor protein
cg2_3.0_scaffold_3223_c_12
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(12794..13282)
DNA (489bp) protein (163aa)
Tax=CG_Saphiro_01
cg2_3.0_scaffold_3223_c_13
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(13586..13987)
DNA (402bp) protein (134aa)
PilT protein n=1 Tax=uncultured bacterium RepID=K2DJ02_9BACT rbh
PilT protein domain-containing protein Tax=CG_Saphiro_01
PilT protein domain-containing protein
cg2_3.0_scaffold_3223_c_14
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(13969..14223)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F4M3_9BACT rbh
Uncharacterized protein Tax=CG_Saphiro_01
cg2_3.0_scaffold_3223_c_15
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(14273..15562)
DNA (1290bp) protein (430aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] id=15191265 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Replicative DNA helicase Tax=CG_Saphiro_01
hypothetical protein
cg2_3.0_scaffold_3223_c_16
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(15568..16119)
DNA (552bp) protein (184aa)
Tax=CG_Saphiro_01
cg2_3.0_scaffold_3223_c_17
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

16147..16593
DNA (447bp) protein (149aa)
id=5085024 Tax=CG_Saphiro_01
cg2_3.0_scaffold_3223_c_18
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

16590..17249
DNA (660bp) protein (220aa)
seg 29..48 Tax=CG_Saphiro_01
seg 29..48 id=91377 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
cg2_3.0_scaffold_3223_c_19
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

17810..17923
DNA (114bp) protein (38aa)
Tax=CG_Saphiro_01
cg2_3.0_scaffold_3223_c_20
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


18115..19371
DNA (1257bp) protein (419aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Saphiro_01
ttr:Tter_1240 histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=72438 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
histidyl-tRNA synthetase (EC:6.1.1.21)
cg2_3.0_scaffold_3223_c_21
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(19337..19735)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU56_9AQUI id=28034 bin=ACD24 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=ACD24 organism_group=WWE3 organism_desc=WWE3 rbh
PilT protein domain-containing protein Tax=CG_Saphiro_01
PilT protein domain-containing protein
cg2_3.0_scaffold_3223_c_22
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(19719..19961)
DNA (243bp) protein (81aa)
Tax=CG_Saphiro_01
cg2_3.0_scaffold_3223_c_23
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


20079..20336
DNA (258bp) protein (86aa)
50S ribosomal protein L31 n=1 Tax=uncultured bacterium RepID=K1YKY4_9BACT rbh
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=CG_Saphiro_01
50S ribosomal protein L31
cg2_3.0_scaffold_3223_c_24
GWE1_OP11_38_10, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

20400..20933
DNA (534bp) protein (178aa)
Peptide chain release factor 1 {ECO:0000313|EMBL:KKQ50456.1}; TaxID=1618488 species="Bacteria; Microgenomates.;" source="Microgenomates (Shapirobacteria) bacterium GW2011_GWE1_38_10.;"
peptide chain release factor 1; K02835 peptide chain release factor RF-1 id=68228 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
peptide chain release factor 1 (bRF-1)
Displaying 24 items

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