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cg2_3.0_scaffold_19_c

Search features with annotation key words

Displaying items 1-30 of 321 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_19_c_c_16S_1
unknown

Not on your lists

comp(188034..189558)
DNA (1525bp)
cg2_3.0_scaffold_19_c_1
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(3..4598)
DNA (4596bp) protein (1532aa)
Outer membrane protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VI95_9PROT id=5088310 bin=OP11_3 species=Micavibrio aeruginosavorus genus=Micavibrio taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
Outer membrane protein Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_2
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

5195..5941
DNA (747bp) protein (249aa)
id=5088309 Tax=CG_Pacebac_02
id=5088309 bin=OP11_3 species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
cg2_3.0_scaffold_19_c_3
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists


6427..8922
DNA (2496bp) protein (832aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_Pacebac_02
leuS; leucyl-tRNA ligase LeuS (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=SYL_BACHD id=5088308 bin=OP11_3 species=Bacillus halodurans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
cg2_3.0_scaffold_19_c_4
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

8983..9615
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C2X4_9BACT rbh
membrane bound high-affinity DNA-binding receptor; K02237 competence protein ComEA Tax=CG_Pacebac_02
membrane bound high-affinity DNA-binding receptor
cg2_3.0_scaffold_19_c_5
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

9701..11077
DNA (1377bp) protein (459aa)
Late competence protein ComEC, DNA transport Tax=CG_Pacebac_02
hypothetical protein
cg2_3.0_scaffold_19_c_6
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

11064..11930
DNA (867bp) protein (289aa)
DNA internalization-like competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=CG_Pacebac_02
beta-lactamase-like; K02238 competence protein ComEC id=131240 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
DNA internalization-like competence protein ComEC/Rec2
cg2_3.0_scaffold_19_c_7
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

12419..13720
DNA (1302bp) protein (434aa)
processing peptidase (EC:3.4.24.64) Tax=CG_Pacebac_02
processing peptidase (EC:3.4.24.64)
Uncharacterized zinc protease ymxG n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8ECK6_9FIRM id=5088304 bin=OP11_3 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
cg2_3.0_scaffold_19_c_8
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

14176..14643
DNA (468bp) protein (156aa)
Nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=CG_Pacebac_02
Nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Acidilobus saccharovorans (strain DSM 16705 / VKM B-2471 / 345-15) RepID=D9Q2G0_ACIS3 id=5088303 bin=OP11_3 species=Acidilobus saccharovorans genus=Acidilobus taxon_order=Acidilobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
cg2_3.0_scaffold_19_c_9
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

14715..15560
DNA (846bp) protein (282aa)
Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_10
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(15625..15867)
DNA (243bp) protein (81aa)
Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_trna_20
unknown

Not on your lists

comp(15784..15855)
DNA (72bp)
transferRNA
cg2_3.0_scaffold_19_c_11
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

15998..16702
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XCS0_9BACT rbh
Uncharacterized protein Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_12
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

16706..17071
DNA (366bp) protein (122aa)
Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_13
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(17080..17373)
DNA (294bp) protein (98aa)
Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_trna_19
unknown

Not on your lists

comp(17413..17484)
DNA (72bp)
transferRNA
cg2_3.0_scaffold_19_c_14
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(17491..18861)
DNA (1371bp) protein (457aa)
hypothetical protein containing PEGA domain Tax=CG_Pacebac_02
id=5088297 bin=OP11_3 species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
hypothetical protein containing PEGA domain
cg2_3.0_scaffold_19_c_15
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

18911..19936
DNA (1026bp) protein (342aa)
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Pacebac_02
MreB/Mrl family cell shape determining protein
cg2_3.0_scaffold_19_c_16
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

20006..20341
DNA (336bp) protein (112aa)
Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_17
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

20368..20658
DNA (291bp) protein (97aa)
Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_18
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(20663..22120)
DNA (1458bp) protein (486aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9) Tax=CG_Pacebac_02
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY60_9PROT id=5088294 bin=OP11_3 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
hypothetical protein
cg2_3.0_scaffold_19_c_19
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(22117..23556)
DNA (1440bp) protein (480aa)
hypothetical protein Tax=CG_Pacebac_02
hypothetical protein
cg2_3.0_scaffold_19_c_20
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

23959..24768
DNA (810bp) protein (270aa)
glycosyl transferase family protein (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] Tax=CG_Pacebac_02
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QU37_ACEAZ id=5088293 bin=OP11_3 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
N-acetylmannosaminyltransferase
cg2_3.0_scaffold_19_c_21
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(24916..25191)
DNA (276bp) protein (92aa)
id=5088292 Tax=CG_Pacebac_02
id=5088292 bin=OP11_3 species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
cg2_3.0_scaffold_19_c_22
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

25373..25699
DNA (327bp) protein (109aa)
Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_23
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(25775..26179)
DNA (405bp) protein (135aa)
50S ribosomal protein L7/L12 n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V7M2_THELD id=5088290 bin=OP11_3 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=CG_Pacebac_02
50S ribosomal protein L7
cg2_3.0_scaffold_19_c_24
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists


comp(26212..26724)
DNA (513bp) protein (171aa)
LSU ribosomal protein L10p (P0) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CY38_9CLOT id=5088289 bin=OP11_3 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
rplJ; 50S ribosomal protein L10 Tax=CG_Pacebac_02
rplJ; 50S ribosomal protein L10
cg2_3.0_scaffold_19_c_25
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

26942..28909
DNA (1968bp) protein (656aa)
Hypothetical membrane protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GIF9_CALEA id=5088284 bin=OP11_3 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
membrane protein Tax=CG_Pacebac_02
membrane protein
cg2_3.0_scaffold_19_c_26
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

28959..29618
DNA (660bp) protein (220aa)
id=5095775 Tax=CG_Pacebac_02
cg2_3.0_scaffold_19_c_27
CG_Pacebac_02, Pacebacteria, Microgenomates, Bacteria

Not on your lists

29813..31636
DNA (1824bp) protein (608aa)
thrZ; threonyl-tRNA synthetase (EC:6.1.1.3) Tax=CG_Pacebac_02
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=5802518 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) rbh
thrZ; threonyl-tRNA synthetase (EC:6.1.1.3)
Displaying items 1-30 of 321 in total

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