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cg2_3.0_scaffold_1277_c

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1277_c_1
ACD80, SR1, Bacteria

Not on your lists

343..492
DNA (150bp) protein (50aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=ACD80
cg2_3.0_scaffold_1277_c_2
ACD80, SR1, Bacteria

Not on your lists

784..1116
DNA (333bp) protein (111aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=ACD80
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=132212 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
cysteinyl-tRNA synthetase
cg2_3.0_scaffold_1277_c_3
ACD80, SR1, Bacteria

Not on your lists

1165..1416
DNA (252bp) protein (84aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=ACD80
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=132212 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
cg2_3.0_scaffold_1277_c_4
unknown

Not on your lists

2123..2347
DNA (225bp) protein (75aa)

This feature has no annotations

cg2_3.0_scaffold_1277_c_5
ACD80, SR1, Bacteria

Not on your lists

comp(3144..3272)
DNA (129bp) protein (43aa)
lipoprotein
lipoprotein id=982837 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
peptidase, M23/M37 family Tax=ACD80
cg2_3.0_scaffold_1277_c_6
ACD80, SR1, Bacteria

Not on your lists

comp(3348..3518)
DNA (171bp) protein (57aa)
lipoprotein
peptidase, M23/M37 family id=131957 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
peptidase, M23/M37 family Tax=ACD80
cg2_3.0_scaffold_1277_c_7
ACD80, SR1, Bacteria

Not on your lists

comp(3540..3989)
DNA (450bp) protein (150aa)
Peptidase, M23/M37 family n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YK45_9BACT rbh
lipoprotein
peptidase, M23/M37 family Tax=ACD80
cg2_3.0_scaffold_1277_c_8
ACD80, SR1, Bacteria

Not on your lists

comp(3990..4271)
DNA (282bp) protein (94aa)
UPI0003D01E3D related cluster n=1 Tax=unknown RepID=UPI0003D01E3D
lipoprotein
peptidase, M23/M37 family Tax=ACD80
cg2_3.0_scaffold_1277_c_9
ACD80, SR1, Bacteria

Not on your lists

comp(4580..4951)
DNA (372bp) protein (124aa)
hypothetical protein
transmembrane_regions 158..180 Tax=ACD80
transmembrane_regions 158..180 id=131953 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
cg2_3.0_scaffold_1277_c_10
unknown

Not on your lists

4953..5231
DNA (279bp) protein (93aa)

This feature has no annotations

cg2_3.0_scaffold_1277_c_11
unknown

Not on your lists

5507..5794
DNA (288bp) protein (96aa)

This feature has no annotations

cg2_3.0_scaffold_1277_c_12
ACD80, SR1, Bacteria

Not on your lists

comp(5849..6097)
DNA (249bp) protein (83aa)
viral A-type inclusion protein
viral A-type inclusion protein id=982835 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
coiled-coil 401..436 Tax=ACD80
cg2_3.0_scaffold_1277_c_13
ACD80, SR1, Bacteria

Not on your lists

comp(6107..6415)
DNA (309bp) protein (103aa)
viral A-type inclusion protein
coiled-coil 401..436 id=131952 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
coiled-coil 401..436 Tax=ACD80
cg2_3.0_scaffold_1277_c_14
ACD80, SR1, Bacteria

Not on your lists

comp(6419..7417)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1X5Z8_9BACT rbh
coiled-coil 401..436 Tax=ACD80
viral A-type inclusion protein
cg2_3.0_scaffold_1277_c_15
ACD80, SR1, Bacteria

Not on your lists

comp(7523..7813)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1X5Z8_9BACT
viral A-type inclusion protein
coiled-coil 401..436 Tax=ACD80
cg2_3.0_scaffold_1277_c_16
ACD80, SR1, Bacteria

Not on your lists

comp(8048..8248)
DNA (201bp) protein (67aa)
viral A-type inclusion protein
viral A-type inclusion protein id=982835 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
coiled-coil 401..436 Tax=ACD80
cg2_3.0_scaffold_1277_c_17
unknown

Not on your lists

comp(8556..8744)
DNA (189bp) protein (63aa)

This feature has no annotations

cg2_3.0_scaffold_1277_c_18
RAAC1_SR1, RAAC1_SR1, RAAC1_SR1, RAAC1_SR1, SR1, Bacteria

Not on your lists

8890..9207
DNA (318bp) protein (106aa)
hypothetical protein
coiled-coil 88..109 id=982520 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
coiled-coil 88..109 id=982520 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
cg2_3.0_scaffold_1277_c_19
unknown

Not on your lists

comp(9322..9624)
DNA (303bp) protein (101aa)

This feature has no annotations

cg2_3.0_scaffold_1277_c_20
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

9784..9999
DNA (216bp) protein (72aa)
apv:Apar_0656 formate acetyltransferase (EC:2.3.1.54); K00656 formate C-acetyltransferase [EC:2.3.1.54] id=471481 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
formate acetyltransferase (EC:2.3.1.54)
Uncharacterized protein {ECO:0000313|EMBL:CCX80330.1}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
cg2_3.0_scaffold_1277_c_21
GWF2_OP11_38_9, Pacebacteria, Microgenomates, Bacteria

Not on your lists

10003..10725
DNA (723bp) protein (241aa)
formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=4 Tax=Bacteroides RepID=F0R669_BACSH id=5087897 bin=OP11_3 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome rbh
Formate C-acetyltransferase {ECO:0000313|EMBL:KKQ88800.1}; TaxID=1618472 species="Bacteria; Microgenomates.;" source="Microgenomates (Pacebacteria) bacterium GW2011_GWF2_38_9.;"
cg2_3.0_scaffold_1277_c_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11071..11409
DNA (339bp) protein (113aa)
Formate acetyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZS5_9CLOT
Pyruvate-formate lyase {ECO:0000313|EMBL:EKQ53857.1}; Flags: Fragment;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M
formate acetyltransferase
cg2_3.0_scaffold_1277_c_23
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11698..11961)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae DSM 30104 RepID=J2XB18_KLEPN rbh
Uncharacterized protein {ECO:0000313|EMBL:EJK91985.1}; TaxID=1162296 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pne
cg2_3.0_scaffold_1277_c_24
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12313..12657
DNA (345bp) protein (115aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bact
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1JXR5_9BACE rbh
Pyruvate formate-lyase 1-activating enzyme
cg2_3.0_scaffold_1277_c_25
unknown

Not on your lists

comp(12586..12855)
DNA (270bp) protein (90aa)

This feature has no annotations

cg2_3.0_scaffold_1277_c_26
ACD80, SR1, Bacteria

Not on your lists

comp(13007..13195)
DNA (189bp) protein (63aa)
mtt:Ftrac_3713 prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=ACD80
mtt:Ftrac_3713 prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=132724 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
cg2_3.0_scaffold_1277_c_27

Not on your lists


comp(13196..13501)
DNA (306bp) protein (102aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1234023 species="Bacteria; envir
Proline--tRNA ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XY35_9BACT
hypothetical protein
cg2_3.0_scaffold_1277_c_28
ACD80, SR1, Bacteria

Not on your lists

comp(13511..13771)
DNA (261bp) protein (87aa)
mtt:Ftrac_3713 prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=ACD80
mtt:Ftrac_3713 prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=132724 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Suspect SCG annotation. See neighboring gene [cg2_3.0_scaffold_1277_c_27].
hypothetical protein
cg2_3.0_scaffold_1277_c_29

Not on your lists

comp(14096..14245)
DNA (150bp) protein (50aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1234023 species="Bacteria; envir
Proline--tRNA ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XY35_9BACT
Suspect SCG annotation. See neighboring gene [cg2_3.0_scaffold_1277_c_28].
hypothetical protein
cg2_3.0_scaffold_1277_c_30
unknown

Not on your lists

14488..14661
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

View Taxonomy