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cg2_3.0_scaffold_3421_c

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3421_c_1
unknown

Not on your lists

comp(7..228)
DNA (222bp) protein (74aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_2
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(961..2790)
DNA (1830bp) protein (610aa)
Dockerin type 1
Tax=BJP_08E140C01_Bacteriodales_41_10
cg2_3.0_scaffold_3421_c_3
unknown

Not on your lists

3336..3521
DNA (186bp) protein (62aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_4
unknown

Not on your lists

3564..3779
DNA (216bp) protein (72aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_5
unknown

Not on your lists

3789..3947
DNA (159bp) protein (53aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_6
unknown

Not on your lists

4092..4295
DNA (204bp) protein (68aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_7
unknown

Not on your lists

4296..4586
DNA (291bp) protein (97aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_8
unknown

Not on your lists

5117..5278
DNA (162bp) protein (54aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_9
unknown

Not on your lists

comp(5641..5793)
DNA (153bp) protein (51aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_10
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5790..6038)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
Putative Fe-only hydrogenase id=5102098 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria) rbh
cg2_3.0_scaffold_3421_c_11
ACD80, SR1, Bacteria

Not on your lists

6368..6673
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XIH9_9BACT rbh
hypothetical protein Tax=ACD80
hypothetical protein
cg2_3.0_scaffold_3421_c_12
ACD80, SR1, Bacteria

Not on your lists

6749..6937
DNA (189bp) protein (63aa)
spore germination protein-like protein
spore germination protein-like protein id=983374 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
hypothetical protein Tax=ACD80
cg2_3.0_scaffold_3421_c_13
unknown

Not on your lists

comp(7020..7469)
DNA (450bp) protein (150aa)
Adenylate kinase n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZG56_NODSP Tax=ACD80
Adenylate kinase n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZG56_NODSP id=132102 bin=ACD80 species=Nodularia spumigena genus=Nodularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=ACD80 organism_group=SR1 rbh
hypothetical protein
cg2_3.0_scaffold_3421_c_14
ACD80, SR1, Bacteria

Not on your lists


comp(7774..7995)
DNA (222bp) protein (74aa)
hypothetical protein
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=983433 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
rpsI; ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=ACD80
cg2_3.0_scaffold_3421_c_15
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists


comp(8244..8408)
DNA (165bp) protein (55aa)
50S ribosomal protein L13 n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B4E77A rbh
hypothetical protein
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=868864 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;
cg2_3.0_scaffold_3421_c_16
ACD80, SR1, Bacteria

Not on your lists

comp(8511..8672)
DNA (162bp) protein (54aa)
UPI0003D04040 related cluster n=1 Tax=unknown RepID=UPI0003D04040 rbh
hypothetical protein
ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=ACD80
cg2_3.0_scaffold_3421_c_17
ACD80, SR1, Bacteria

Not on your lists


comp(8723..9028)
DNA (306bp) protein (102aa)
hypothetical protein
Ribosomal protein L17 22..127 id=983435 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
Ribosomal_L17 22..127 Tax=ACD80
cg2_3.0_scaffold_3421_c_18
ACD80, SR1, Bacteria

Not on your lists

comp(9266..9673)
DNA (408bp) protein (136aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=ACD80
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=132108 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
cg2_3.0_scaffold_3421_c_19
ACD80, SR1, Bacteria

Not on your lists

comp(9863..9985)
DNA (123bp) protein (41aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=983436 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=ACD80
cg2_3.0_scaffold_3421_c_20
ACD80, SR1, Bacteria

Not on your lists


comp(10226..10849)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLN6_9BACT id=983439 bin=RAAC1_SR1 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=RAAC1_SR1 organism_group=SR1 rbh
30S ribosomal protein S4
ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=ACD80
cg2_3.0_scaffold_3421_c_21
unknown

Not on your lists

10889..11101
DNA (213bp) protein (71aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_22
ACD80, SR1, Bacteria

Not on your lists


comp(11188..11322)
DNA (135bp) protein (45aa)
30S ribosomal protein S11 n=1 Tax=Aureoumbra lagunensis RepID=C6KIW0_9STRA id=983441 bin=RAAC1_SR1 species=Aureoumbra lagunensis genus=unknown taxon_order=unknown taxon_class=Pelagophyceae phylum=unknown tax=RAAC1_SR1 organism_group=SR1 rbh
30S ribosomal protein S11
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=ACD80
cg2_3.0_scaffold_3421_c_23

Not on your lists


comp(11548..11697)
DNA (150bp) protein (50aa)
30S ribosomal protein S13 n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B43D61 rbh
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
cg2_3.0_scaffold_3421_c_24
ACD80, SR1, Bacteria

Not on your lists


comp(12425..12580)
DNA (156bp) protein (52aa)
UPI0003CFB489 related cluster n=1 Tax=unknown RepID=UPI0003CFB489 rbh
50S ribosomal protein L21
ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=ACD80
cg2_3.0_scaffold_3421_c_25
unknown

Not on your lists

12993..13184
DNA (192bp) protein (64aa)

This feature has no annotations

cg2_3.0_scaffold_3421_c_26
ACD80, SR1, Bacteria

Not on your lists


comp(13391..13609)
DNA (219bp) protein (73aa)
hypothetical protein
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=983458 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=ACD80
cg2_3.0_scaffold_3421_c_27
ACD80, SR1, Bacteria

Not on your lists

comp(13823..14047)
DNA (225bp) protein (75aa)
hypothetical protein
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 id=132113 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=ACD80
cg2_3.0_scaffold_3421_c_28
unknown

Not on your lists

comp(14957..15076)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 28 items

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