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cg2_3.0_scaffold_5143_c

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_5143_c_1
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

2..379
DNA (378bp) protein (126aa)
Tax=CG_Berkel_03
cg2_3.0_scaffold_5143_c_2
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

500..1186
DNA (687bp) protein (229aa)
hypothetical protein Tax=CG_Berkel_03
hypothetical protein
cg2_3.0_scaffold_5143_c_3
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

1278..2060
DNA (783bp) protein (261aa)
Sugar-binding transcriptional regulator, LacI Tax=CG_Berkel_03
Sugar-binding transcriptional regulator, LacI
cg2_3.0_scaffold_5143_c_4
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

2192..2998
DNA (807bp) protein (269aa)
bifunctional protein folD (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=CG_Berkel_03
bifunctional protein folD (EC:1.5.1.5)
cg2_3.0_scaffold_5143_c_5
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

3251..4336
DNA (1086bp) protein (362aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=CG_Berkel_03
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] id=15188236 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome rbh
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
cg2_3.0_scaffold_5143_c_6
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

4592..5758
DNA (1167bp) protein (389aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=CG_Berkel_03
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=uncultured bacterium RepID=K2DZ96_9BACT rbh
cg2_3.0_scaffold_5143_c_7
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists


5787..6062
DNA (276bp) protein (92aa)
50S ribosomal protein L9 n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GH47_PROFC rbh
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=CG_Berkel_03
rplI; 50S ribosomal protein L9
cg2_3.0_scaffold_5143_c_8
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

6134..7111
DNA (978bp) protein (326aa)
id=2815063 Tax=CG_Berkel_03
cg2_3.0_scaffold_5143_c_9
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

7244..7801
DNA (558bp) protein (186aa)
LemA-like protein n=1 Tax=uncultured bacterium RepID=K2B2V0_9BACT rbh
hypothetical protein ; K03744 LemA protein Tax=CG_Berkel_03
membrane protein
cg2_3.0_scaffold_5143_c_10
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

7843..8721
DNA (879bp) protein (293aa)
HtpX2; heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CG_Berkel_03
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000365932E rbh
hypothetical protein
cg2_3.0_scaffold_5143_c_11
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

comp(8793..8945)
DNA (153bp) protein (51aa)
Tax=CG_Berkel_03
cg2_3.0_scaffold_5143_c_12
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

9012..11063
DNA (2052bp) protein (684aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=CG_Berkel_03
NAD-dependent DNA ligase (EC:6.5.1.2)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035FDADC rbh
cg2_3.0_scaffold_5143_c_13
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

11060..12304
DNA (1245bp) protein (415aa)
Tax=CG_Berkel_03
cg2_3.0_scaffold_5143_c_14
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

12354..12650
DNA (297bp) protein (99aa)
aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=CG_Berkel_03
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=15188851 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage) rbh
aspartyl/glutamyl-tRNA amidotransferase subunit C
cg2_3.0_scaffold_5143_c_15
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

12651..14069
DNA (1419bp) protein (473aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_Berkel_03
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
cg2_3.0_scaffold_5143_c_16
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

14082..14750
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Leuconostoc carnosum (strain JB16) RepID=K0DEK4_LEUCJ rbh
hypothetical protein Tax=CG_Berkel_03
hypothetical protein
cg2_3.0_scaffold_5143_c_17
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

14759..16219
DNA (1461bp) protein (487aa)
N-6 DNA Methylase family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKH7_9BACT rbh
Type II modification enzyme Tax=CG_Berkel_03
Eco57I restriction-modification methylase
cg2_3.0_scaffold_5143_c_18
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

16230..16916
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LTW7_9CLOT
hypothetical protein Tax=CG_Berkel_03
hypothetical protein
cg2_3.0_scaffold_5143_c_19
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

16918..17346
DNA (429bp) protein (143aa)
hypothetical protein
hypothetical protein Tax=CG_Berkel_03
hypothetical protein id=15188849 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage) rbh
cg2_3.0_scaffold_5143_c_20
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

17343..18788
DNA (1446bp) protein (482aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=CG_Berkel_03
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
cg2_3.0_scaffold_5143_c_21
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

18877..20472
DNA (1596bp) protein (532aa)
Two-component sensor histidine kinase n=1 Tax=uncultured bacterium RepID=K1YCB7_9BACT rbh
two component system histidine kinase Tax=CG_Berkel_03
Sensor protein resE
cg2_3.0_scaffold_5143_c_22
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

20908..21285
DNA (378bp) protein (126aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3) Tax=CG_Berkel_03
PAS/PAC sensor hybrid histidine kinase
cg2_3.0_scaffold_5143_c_23
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

21287..21550
DNA (264bp) protein (88aa)
hypothetical protein Tax=CG_Berkel_03
hypothetical protein id=15188847 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage) rbh
hypothetical protein
cg2_3.0_scaffold_5143_c_24
CG_Berkel_03, Berkelbacteria, Bacteria

Not on your lists

21868..22158
DNA (291bp) protein (97aa)
Tax=CG_Berkel_03
Displaying 24 items

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