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cg2_3.0_scaffold_5607_c

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_5607_c_1
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(496..921)
DNA (426bp) protein (142aa)
50S ribosomal protein L19 {ECO:0000313|EMBL:KKT37729.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=5803271 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
LSU ribosomal protein L19P
cg2_3.0_scaffold_5607_c_2
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(940..1680)
DNA (741bp) protein (247aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=CG_Nomura_02
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=5803270 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
RluA family pseudouridine synthase
cg2_3.0_scaffold_5607_c_3
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1683..2366)
DNA (684bp) protein (228aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=CG_Nomura_02
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Undecaprenyl pyrophosphate synthetase n=1 Tax=sediment metagenome RepID=D9PKQ8_9ZZZZ rbh
cg2_3.0_scaffold_5607_c_4
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2505..2789)
DNA (285bp) protein (95aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=CG_Nomura_02
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035E6FD3 rbh
acylphosphatase
cg2_3.0_scaffold_5607_c_5
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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comp(2814..3479)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z103_9BACT rbh
Uncharacterized protein Tax=CG_Nomura_02
cg2_3.0_scaffold_5607_c_6
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4473..4757
DNA (285bp) protein (95aa)
recombinase Tax=CG_Nomura_02
recombinase id=5803696 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_5607_c_7
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4828..5166)
DNA (339bp) protein (113aa)
Tax=CG_Nomura_02
cg2_3.0_scaffold_5607_c_8
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5194..5352)
DNA (159bp) protein (53aa)
id=5803091 Tax=CG_Nomura_01
id=5803091 bin=OD1_GWC2_34_28 species=unknown genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg2_3.0_scaffold_5607_c_9
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5526..6191)
DNA (666bp) protein (222aa)
Protein of unknown function DUF955 Tax=CG_Nomura_02
Protein of unknown function DUF955 id=5803092 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg2_3.0_scaffold_5607_c_10
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6188..6526)
DNA (339bp) protein (113aa)
coiled-coil Tax=CG_Nomura_02
coiled-coil id=5803093 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg2_3.0_scaffold_5607_c_11
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6932..7261)
DNA (330bp) protein (110aa)
Tax=CG_Nomura_02
cg2_3.0_scaffold_5607_c_12
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7263..7844)
DNA (582bp) protein (194aa)
Tax=CG_Nomura_02
cg2_3.0_scaffold_5607_c_13
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7856..8422)
DNA (567bp) protein (189aa)
Tax=CG_Nomura_02
cg2_3.0_scaffold_5607_c_14
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8431..9507)
DNA (1077bp) protein (359aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=CG_Nomura_02
Type IV pilus assembly protein PilM id=5227483 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
type IV pilus assembly protein PilM
cg2_3.0_scaffold_5607_c_15
GWD1_OD1_44_10_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9526..10125)
DNA (600bp) protein (200aa)
Similar to alkaline phosphatase PhoA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7H6_9BACT id=72127 bin=ACD50 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
DedA family protein {ECO:0000313|EMBL:KKT30404.1}; TaxID=1618757 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWD1_44_10.;"
DedA family protein
cg2_3.0_scaffold_5607_c_16
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(10195..10527)
DNA (333bp) protein (111aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10) Tax=CG_Nomura_02
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=5803260 bin=OD1_GWC2_34_28 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
methionyl-tRNA synthetase (EC:6.1.1.10)
cg2_3.0_scaffold_5607_c_17
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10524..10928)
DNA (405bp) protein (135aa)
putative Holliday junction resolvase (EC:3.1.-.-) Tax=CG_Nomura_02
putative Holliday junction resolvase (EC:3.1.-.-)
Displaying 17 items

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