ggKbase home page

cg2_3.0_scaffold_6346_c

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_6346_c_1
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

1..501
DNA (501bp) protein (167aa)
CODH nickel-insertion accessory protein n=1 Tax=sediment metagenome RepID=D9PKM1_9ZZZZ
cooC-2; putative carbon monoxide dehydrogenase maturation factor (accessory nickel-insertion protein) Tax=CG_Dehalo_01
cooC-2; putative carbon monoxide dehydrogenase maturation factor (accessory nickel-insertion protein)
cg2_3.0_scaffold_6346_c_2
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

456..1280
DNA (825bp) protein (275aa)
CODH nickel-insertion accessory protein n=1 Tax=sediment metagenome RepID=D9PKM1_9ZZZZ rbh
cooC-2; putative carbon monoxide dehydrogenase maturation factor (accessory nickel-insertion protein) Tax=CG_Dehalo_01
cooC-2; putative carbon monoxide dehydrogenase maturation factor (accessory nickel-insertion protein)
cg2_3.0_scaffold_6346_c_3
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

1273..1938
DNA (666bp) protein (222aa)
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein id=1242955 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_6346_c_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

1959..2525
DNA (567bp) protein (189aa)
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=CG_Dehalo_01
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] id=1241404 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
GTP cyclohydrolase I (EC:3.5.4.16)
cg2_3.0_scaffold_6346_c_5
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(2600..3256)
DNA (657bp) protein (219aa)
Phosphoglycerate mutase n=1 Tax=Desulfobacca acetoxidans DSM 11109 RepID=F2NE04_DESAR id=1242945 bin=RBG2 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi rbh
phosphoglycerate mutase Tax=CG_Dehalo_01
phosphoglycerate mutase
cg2_3.0_scaffold_6346_c_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(3373..3822)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3D1_DEHLB id=1241223 bin=RBG2 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein; K09117 hypothetical protein Tax=CG_Dehalo_01
YqeY-like protein
cg2_3.0_scaffold_6346_c_7
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(3827..4003)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKQ3_9CHLR id=1241224 bin=RBG2 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=RBG_13_Chloroflexi_51_36_curated
30S ribosomal protein S21
cg2_3.0_scaffold_6346_c_8
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(4097..4558)
DNA (462bp) protein (154aa)
methylmalonyl-CoA mutase-like protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=CG_Dehalo_01
B12 binding domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F865_9DELT id=1242840 bin=RBG2 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi rbh
(R)-methylmalonyl-CoA mutase, adenosylcobamide-binding subunit
cg2_3.0_scaffold_6346_c_9
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(4509..6188)
DNA (1680bp) protein (560aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=CG_Dehalo_01
drm:Dred_1768 methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] id=1242841 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
cg2_3.0_scaffold_6346_c_10
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

6354..7625
DNA (1272bp) protein (424aa)
polynucleotide adenylyltransferase-domain containing protein; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=CG_Dehalo_01
Polynucleotide adenylyltransferase region n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3A5_DEHLB rbh
polynucleotide adenylyltransferase-domain containing protein
cg2_3.0_scaffold_6346_c_11
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(7606..8187)
DNA (582bp) protein (194aa)
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein id=1243410 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_6346_c_12
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(8209..9078)
DNA (870bp) protein (290aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148) Tax=CG_Dehalo_01
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=5 Tax=Dehalococcoides mccartyi RepID=ISPE_DEHSB rbh
cg2_3.0_scaffold_6346_c_13
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(9053..9943)
DNA (891bp) protein (297aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=CG_Dehalo_01
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BGQ4_DEHSV rbh
ksgA; dimethyladenosine transferase
Displaying 13 items

View Taxonomy