ggKbase home page

cg2_3.0_scaffold_2476_c

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2476_c_1
unknown

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)

This feature has no annotations

cg2_3.0_scaffold_2476_c_2
unknown

Not on your lists

comp(88..192)
DNA (105bp) protein (35aa)

This feature has no annotations

cg2_3.0_scaffold_2476_c_3
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(373..1008)
DNA (636bp) protein (212aa)
truB; tRNA pseudouridine 55 synthase; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=CG_Dehalo_01
tRNA pseudouridine synthase B 1 n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY46_9AQUI id=1241531 bin=RBG2 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RBG2 organism_group=Chloroflexi rbh
truB; tRNA pseudouridine 55 synthase
cg2_3.0_scaffold_2476_c_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(1390..2307)
DNA (918bp) protein (306aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) (EC:1.5.7.1) Tax=CG_Dehalo_01
CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) (EC:1.5.7.1)
dak:DaAHT2_0826 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel id=1242956 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_2476_c_5
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(2353..3006)
DNA (654bp) protein (218aa)
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein id=1241377 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
metV; 5,10-methylene-tetrahydrofolate reductase subunit MetV
cg2_3.0_scaffold_2476_c_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(3003..5660)
DNA (2658bp) protein (886aa)
fdhA; formate dehydrogenase subunit alpha; K05299 formate dehydrogenase alpha subunit [EC:1.2.1.43] Tax=CG_Dehalo_01
Formate dehydrogenase alpha subunit n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RG40_MOOTA rbh
fdhA; formate dehydrogenase subunit alpha
cg2_3.0_scaffold_2476_c_7
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(5657..5875)
DNA (219bp) protein (73aa)
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6); K06282 hydrogenase small subunit [EC:1.12.99.6] Tax=CG_Dehalo_01
deh:cbdb_A130 hupS; Ni/Fe hydrogenase small subunit; K06282 hydrogenase small subunit [EC:1.12.99.6] id=1242960 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hupS; [Ni/Fe] hydrogenase, group 1, small subunit
cg2_3.0_scaffold_2476_c_8
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(6550..6816)
DNA (267bp) protein (89aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J5R6_NOSP7 rbh
addiction module antitoxin; K06218 RelE protein Tax=CG_Dehalo_01
addiction module antitoxin
cg2_3.0_scaffold_2476_c_9
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(6806..7057)
DNA (252bp) protein (84aa)
id=2501316 Tax=CG_Dehalo_01
cg2_3.0_scaffold_2476_c_10
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

7362..7574
DNA (213bp) protein (71aa)
Putative uncharacterized protein Tax=CG_Dehalo_01
cg2_3.0_scaffold_2476_c_11
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(8109..8264)
DNA (156bp) protein (52aa)
Tax=CG_Dehalo_01
cg2_3.0_scaffold_2476_c_12
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

8479..9150
DNA (672bp) protein (224aa)
Metal-dependent hydrolase, beta-lactamase superfamily II n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KF21_9FIRM
metal-dependent hydrolase, beta-lactamase superfamily II Tax=CG_Dehalo_01
metal-dependent hydrolase, beta-lactamase superfamily II
cg2_3.0_scaffold_2476_c_13
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(9353..11302)
DNA (1950bp) protein (650aa)
2Fe-2S iron-sulfur cluster binding domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F3P7_9DELT rbh
ferredoxin Tax=CG_Dehalo_01
ferredoxin
cg2_3.0_scaffold_2476_c_14
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(11513..12778)
DNA (1266bp) protein (422aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Dehalo_01
det:DET0006 hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=1241833 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
cg2_3.0_scaffold_2476_c_15
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

12876..15092
DNA (2217bp) protein (739aa)
(p)ppGpp synthetase I (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=CG_Dehalo_01
det:DET0005 relA; GTP pyrophosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] id=1241832 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
(p)ppGpp synthetase I (EC:2.7.6.5)
cg2_3.0_scaffold_2476_c_16
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


15061..15324
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4J1_ANATU id=1241831 bin=RBG2 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=CG_Dehalo_01
30S ribosomal protein S20
cg2_3.0_scaffold_2476_c_17
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

15334..16008
DNA (675bp) protein (225aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] Tax=CG_Dehalo_01
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FPB3_DEHSB rbh
cg2_3.0_scaffold_2476_c_18
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(16189..16653)
DNA (465bp) protein (155aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=CG_Dehalo_01
def; peptide deformylase (EC:3.5.1.88); K01462 [EC:3.5.1.88] id=1242980 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
peptide deformylase
cg2_3.0_scaffold_2476_c_19
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

16846..17493
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYQ4_9FIRM rbh
hypothetical protein; K07043 Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_2476_c_20
unknown

Not on your lists

comp(17486..17698)
DNA (213bp) protein (71aa)

This feature has no annotations

cg2_3.0_scaffold_2476_c_21
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18039..18191
DNA (153bp) protein (51aa)
Hypothetical sensory transduction histidine kinase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUQ7_METMA rbh
Sensory transduction histidine kinase {ECO:0000313|EMBL:AKB77525.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Me
sensory transduction histidine kinase
Displaying 21 items

View Taxonomy