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cg2_3.0_scaffold_3518_c

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3518_c_1
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(1..744)
DNA (744bp) protein (248aa)
Uncharacterized protein n=3 Tax=Dehalococcoides mccartyi RepID=M1RB72_9CHLR rbh
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_3518_c_2
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(734..1348)
DNA (615bp) protein (205aa)
RNA polymerase sigma-70 factor, ECF subfamily n=3 Tax=Dehalococcoides mccartyi RepID=M1QWM6_9CHLR rbh
RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Dehalo_01
ECF subfamily RNA polymerase sigma factor
cg2_3.0_scaffold_3518_c_3
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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1387..1929
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3INT9_9PLAN rbh
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_3518_c_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(2024..2506)
DNA (483bp) protein (161aa)
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein id=1242219 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_3518_c_5
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

2707..4509
DNA (1803bp) protein (601aa)
Radical SAM domain protein n=1 Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FPC5_DEHSB rbh
radical SAM domain-containing protein Tax=CG_Dehalo_01
radical SAM domain-containing protein
cg2_3.0_scaffold_3518_c_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

4838..8458
DNA (3621bp) protein (1207aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_Dehalo_01
dev:DhcVS_543 rpoB; DNA-directed RNA polymerase beta subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=1241343 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
cg2_3.0_scaffold_3518_c_7
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

8577..12671
DNA (4095bp) protein (1365aa)
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=CG_Dehalo_01
DNA-directed RNA polymerase subunit beta' n=2 Tax=Dehalococcoides mccartyi RepID=D2BH96_DEHSV rbh
DNA-directed RNA polymerase subunit beta'
cg2_3.0_scaffold_3518_c_8
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

12680..13696
DNA (1017bp) protein (339aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=CG_Dehalo_01
deh:cbdb_A588 ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB id=1241341 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
Holliday junction DNA helicase RuvB
cg2_3.0_scaffold_3518_c_9
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13735..14538)
DNA (804bp) protein (268aa)
transmembrane_regions 152..174 Tax=CG_Dehalo_01
transmembrane_regions 152..174 id=1241340 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_3518_c_10
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(14548..14883)
DNA (336bp) protein (112aa)
transcriptional regulator, PadR-like family Tax=CG_Dehalo_01
putative transcriptional regulator id=1241339 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
transcriptional regulator, PadR-like family
Displaying 10 items

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