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cg2_3.0_scaffold_5487_c

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_5487_c_1
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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2..718
DNA (717bp) protein (239aa)
Marine sediment metagenome DNA, contig: S03H2_C02388 Tax=CG_Dehalo_01
cg2_3.0_scaffold_5487_c_2
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(1005..4550)
DNA (3546bp) protein (1182aa)
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=CG_Dehalo_01
det:DET1464 dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] id=1241653 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
cg2_3.0_scaffold_5487_c_3
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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4940..5650
DNA (711bp) protein (237aa)
Integral membrane protein TIGR01906 n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2N0_DEHLB rbh
integral membrane protein Tax=CG_Dehalo_01
integral membrane protein
cg2_3.0_scaffold_5487_c_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(5595..5954)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWQ8_METPS rbh
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_5487_c_5
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(5983..7755)
DNA (1773bp) protein (591aa)
glmS1; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16) Tax=CG_Dehalo_01
glmS1; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
tba:TERMP_00666 glucosamine--fructose-6-phosphate aminotransferase id=1242755 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_5487_c_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(7743..9068)
DNA (1326bp) protein (442aa)
sugar-phosphate nucleotydyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=CG_Dehalo_01
Glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Methanobacterium sp. AL-21 RepID=F0T600_METSL id=1242757 bin=RBG2 species=Methanobacterium sp. AL-21 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=RBG2 organism_group=Chloroflexi rbh
glucose-1-phosphate thymidylyltransferase
cg2_3.0_scaffold_5487_c_7
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(9065..10441)
DNA (1377bp) protein (459aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=CG_Dehalo_01
abi:Aboo_1538 phosphoglucosamine mutase (EC:5.4.2.10) id=1242758 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
phosphoglucosamine mutase (EC:5.4.2.10)
cg2_3.0_scaffold_5487_c_8
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(10560..10775)
DNA (216bp) protein (72aa)
regulatory protein MerR Tax=CG_Dehalo_01
regulatory protein MerR id=1241119 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
regulatory protein MerR
cg2_3.0_scaffold_5487_c_9
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(10992..11552)
DNA (561bp) protein (187aa)
Integrase catalytic region (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AXM0_9ZZZZ rbh
integrase family protein Tax=CG_Dehalo_01
integrase family protein
Displaying 9 items

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