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cg2_3.0_scaffold_2032_c

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2032_c_1
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(3..182)
DNA (180bp) protein (60aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=CG_Dehalo_01
rpmC, SCD31.35; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=1242020 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
50S ribosomal protein L29
cg2_3.0_scaffold_2032_c_2
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(172..597)
DNA (426bp) protein (142aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=CG_Dehalo_01
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=1242021 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rplP; 50S ribosomal protein L16
cg2_3.0_scaffold_2032_c_3
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(557..1240)
DNA (684bp) protein (228aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=CG_Dehalo_01
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=1242022 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rpsC; 30S ribosomal protein S3
cg2_3.0_scaffold_2032_c_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(1243..1578)
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=5 Tax=Dehalococcoides RepID=RL22_DEHE1 id=1242023 bin=RBG2 species=unknown genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=CG_Dehalo_01
rplV; 50S ribosomal protein L22
cg2_3.0_scaffold_2032_c_5
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(1585..1878)
DNA (294bp) protein (98aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=CG_Dehalo_01
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=1242024 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
30S ribosomal protein S19
cg2_3.0_scaffold_2032_c_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(1880..2701)
DNA (822bp) protein (274aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=CG_Dehalo_01
tro:trd_0981 rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=1242025 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rplB; 50S ribosomal protein L2
cg2_3.0_scaffold_2032_c_7
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(2909..3193)
DNA (285bp) protein (95aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=CG_Dehalo_01
ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23 id=1242026 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rplW; 50S ribosomal protein L23
cg2_3.0_scaffold_2032_c_8
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(3180..3911)
DNA (732bp) protein (244aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=CG_Dehalo_01
rplD; ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=1242027 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
50S ribosomal protein L4
cg2_3.0_scaffold_2032_c_9
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(3913..4539)
DNA (627bp) protein (209aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=CG_Dehalo_01
ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=1242028 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
50S ribosomal protein L3
cg2_3.0_scaffold_2032_c_10
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(4641..4949)
DNA (309bp) protein (103aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=CG_Dehalo_01
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=1242029 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rpsJ; 30S ribosomal protein S10
cg2_3.0_scaffold_2032_c_11
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(4946..7072)
DNA (2127bp) protein (709aa)
ttr:Tter_0712 translation elongation factor G; K02355 elongation factor EF-G [EC:3.6.5.3] id=1242030 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
FusA; elongation factor G; K02355 elongation factor G Tax=CG_Dehalo_01
FusA; elongation factor G
cg2_3.0_scaffold_2032_c_12
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(7082..7555)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=Candidatus Odyssella thessalonicensis L13 RepID=UPI000225BC72 id=1242031 bin=RBG2 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi rbh
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=CG_Dehalo_01
rpsG; 30S ribosomal protein S7
cg2_3.0_scaffold_2032_c_13
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(7570..8001)
DNA (432bp) protein (144aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=CG_Dehalo_01
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=1242032 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rpsL; 30S ribosomal protein S12
cg2_3.0_scaffold_2032_c_14
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

8294..8815
DNA (522bp) protein (174aa)
hypothetical protein; K08999 hypothetical protein Tax=CG_Dehalo_01
hypothetical protein; K08999 hypothetical protein id=1241772 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_2032_c_15
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

8818..9078
DNA (261bp) protein (87aa)
Tax=CG_Dehalo_01
cg2_3.0_scaffold_2032_c_16
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

9071..10000
DNA (930bp) protein (310aa)
ATP synthase F0 subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] Tax=CG_Dehalo_01
ATP synthase subunit a n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZS9_DEHLB rbh
ATP synthase F0 subunit A
cg2_3.0_scaffold_2032_c_17
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

10028..10255
DNA (228bp) protein (76aa)
ATP synthase F0 subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=CG_Dehalo_01
ATP synthase subunit c n=8 Tax=Dehalococcoides mccartyi RepID=ATPL_DEHE1 rbh
atpE; ATP synthase F0 subunit C
cg2_3.0_scaffold_2032_c_18
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

10280..10792
DNA (513bp) protein (171aa)
ATP synthase F0 subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=CG_Dehalo_01
ATP synthase subunit b n=5 Tax=Dehalococcoides mccartyi RepID=ATPF_DEHSB rbh
ATP synthase subunit B
cg2_3.0_scaffold_2032_c_19
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

10809..11342
DNA (534bp) protein (178aa)
ATP synthase F1 subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=CG_Dehalo_01
ATP synthase subunit delta n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZT2_DEHLB rbh
ATP synthase F1 subunit delta
cg2_3.0_scaffold_2032_c_20
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

11345..12850
DNA (1506bp) protein (502aa)
atpA; ATP synthase F1 subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=CG_Dehalo_01
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=2 Tax=Dehalococcoides mccartyi RepID=D2BH55_DEHSV rbh
cg2_3.0_scaffold_2032_c_21
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

12954..13811
DNA (858bp) protein (286aa)
atpG; ATP synthase F1 subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=CG_Dehalo_01
F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=ATPG_DEHE1 rbh
cg2_3.0_scaffold_2032_c_22
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

13929..15323
DNA (1395bp) protein (465aa)
ATP synthase F1 subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=CG_Dehalo_01
ATP synthase subunit beta n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZT5_DEHLB rbh
ATP synthase F1 subunit beta
cg2_3.0_scaffold_2032_c_23
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

15367..15804
DNA (438bp) protein (146aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14); K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=CG_Dehalo_01
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=ATPE_DEHE1 rbh
cg2_3.0_scaffold_2032_c_24
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(15818..16045)
DNA (228bp) protein (76aa)
RNA-binding protein; K06960 Tax=CG_Dehalo_01
hypothetical protein; K06960 id=1241942 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_2032_c_25
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(16042..16401)
DNA (360bp) protein (120aa)
30S ribosomal protein S16 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S351_THEOJ rbh
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=CG_Dehalo_01
30S ribosomal protein S16
cg2_3.0_scaffold_2032_c_26
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

16553..16903
DNA (351bp) protein (117aa)
Flavodoxin n=2 Tax=Thauera RepID=N6XS64_9RHOO rbh
flavodoxin Tax=CG_Dehalo_01
flavodoxin
cg2_3.0_scaffold_2032_c_27
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(16971..17714)
DNA (744bp) protein (248aa)
ApbE family lipoprotein n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CQZ0_DESK7 id=1242271 bin=RBG2 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein; K09740 hypothetical protein Tax=CG_Dehalo_01
ApbE family lipoprotein
cg2_3.0_scaffold_2032_c_28
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(17716..18126)
DNA (411bp) protein (137aa)
iron-sulfur cluster-binding protein, ferredoxin-like protein Tax=CG_Dehalo_01
iron-sulfur cluster-binding protein, ferredoxin-like protein id=1242272 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
iron-sulfur cluster-binding protein, ferredoxin-like protein
cg2_3.0_scaffold_2032_c_29
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(18132..19340)
DNA (1209bp) protein (403aa)
DUF39 domain-containing protein Tax=CG_Dehalo_01
dtu:Dtur_0732 protein of unknown function DUF39 id=1242273 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_2032_c_30
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(19354..20127)
DNA (774bp) protein (258aa)
ribulose-1,5-biphosphate synthetase; K03146 thiamine biosynthetic enzyme Tax=CG_Dehalo_01
mth:MTH1620 ribulose-1,5-biphosphate synthetase; K03146 thiamine biosynthetic enzyme id=1242274 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
ribulose-1,5-biphosphate synthetase
Displaying 30 items

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