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cg2_3.0_scaffold_4852_c

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_4852_c_1
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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1..123
DNA (123bp) protein (41aa)
Tax=CG_Dehalo_01
cg2_3.0_scaffold_4852_c_2
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(118..786)
DNA (669bp) protein (223aa)
transmembrane_regions 20..42 Tax=CG_Dehalo_01
transmembrane_regions 20..42 id=1241483 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
cg2_3.0_scaffold_4852_c_3
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(779..1735)
DNA (957bp) protein (319aa)
transmembrane_regions 20..42 Tax=CG_Dehalo_01
transmembrane_regions 20..42 id=1241483 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_4852_c_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(1896..2459)
DNA (564bp) protein (188aa)
Putative signal peptidase I n=1 Tax=Thermococcus sp. CL1 RepID=I3ZUH4_9EURY rbh
putative signal peptidase I Tax=CG_Dehalo_01
putative signal peptidase I
cg2_3.0_scaffold_4852_c_5
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(2555..2911)
DNA (357bp) protein (119aa)
Tax=CG_Dehalo_01
cg2_3.0_scaffold_4852_c_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(3154..3582)
DNA (429bp) protein (143aa)
Tax=CG_Dehalo_01
cg2_3.0_scaffold_4852_c_7
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(3841..4176)
DNA (336bp) protein (112aa)
Tax=CG_Dehalo_01
cg2_3.0_scaffold_4852_c_8
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

4219..4512
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHY3_9BACT rbh
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_4852_c_9
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

4512..4733
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0M8X0_9EURY rbh
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_4852_c_10
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

4833..5087
DNA (255bp) protein (85aa)
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_4852_c_11
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

5084..5293
DNA (210bp) protein (70aa)
YcfA family protein Tax=CG_Dehalo_01
YcfA family protein
cg2_3.0_scaffold_4852_c_12
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

5304..5663
DNA (360bp) protein (120aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000361EE75 rbh
hypothetical protein Tax=CG_Dehalo_01
Retroviral aspartyl protease
cg2_3.0_scaffold_4852_c_13
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(5731..5892)
DNA (162bp) protein (54aa)
Conserved domain protein n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3ZA66_DEHE1 rbh
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_4852_c_14
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(5941..6315)
DNA (375bp) protein (125aa)
Winged helix family two component transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB78_9RHIZ id=1241476 bin=RBG2 species=Mesorhizobium amorphae genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi rbh
two component transcriptional regulator Tax=CG_Dehalo_01
transcriptional regulator
cg2_3.0_scaffold_4852_c_15

Not on your lists

comp(6420..6770)
DNA (351bp) protein (117aa)
Marine sediment metagenome DNA, contig: S06H3_S07567 {ECO:0000313|EMBL:GAI18398.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
winged helix family two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE id=1241474 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
transcriptional regulator
cg2_3.0_scaffold_4852_c_16
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(6719..7126)
DNA (408bp) protein (136aa)
winged helix family two component transcriptional regulator; K07775 two-component system, OmpR family, response regulator ResD Tax=CG_Dehalo_01
rdhD; DNA-binding response regulator id=1241475 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rdhD; DNA-binding response regulator
cg2_3.0_scaffold_4852_c_17
unknown

Not on your lists

comp(7158..7382)
DNA (225bp) protein (75aa)

This feature has no annotations

cg2_3.0_scaffold_4852_c_18
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

7456..7650
DNA (195bp) protein (65aa)
Transcriptional regulator, MerR family n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1N3_DEHLB rbh
MerR family transcriptional regulator Tax=CG_Dehalo_01
MerR family transcriptional regulator
cg2_3.0_scaffold_4852_c_19
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(7705..9063)
DNA (1359bp) protein (453aa)
peptidase U62 modulator of DNA gyrase; K03568 TldD protein Tax=CG_Dehalo_01
dly:Dehly_0371 peptidase U62 modulator of DNA gyrase; K03568 TldD protein id=1241805 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
peptidase U62 modulator of DNA gyrase
cg2_3.0_scaffold_4852_c_20
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

9303..9566
DNA (264bp) protein (88aa)
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein id=1241256 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_4852_c_21
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(9547..10863)
DNA (1317bp) protein (439aa)
folylpolyglutamate synthetase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=CG_Dehalo_01
det:DET0016 folylpolyglutamate synthetase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] id=1241255 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
folylpolyglutamate synthetase (EC:6.3.2.17)
cg2_3.0_scaffold_4852_c_22
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

10983..11786
DNA (804bp) protein (268aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=CG_Dehalo_01
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LE33_9BACT rbh
cg2_3.0_scaffold_4852_c_23
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

11761..11952
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1V7_THERP rbh
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
cg2_3.0_scaffold_4852_c_24
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(12040..12414)
DNA (375bp) protein (125aa)
Tax=CG_Dehalo_01
Displaying 24 items

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