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cg2_3.0_scaffold_3077_c

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3077_c_1
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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175..1299
DNA (1125bp) protein (375aa)
Butyryl-CoA dehydrogenase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U100_9EURY
acyl-CoA dehydrogenase domain-containing protein Tax=CG_Dehalo_01
acyl-CoA dehydrogenase domain-containing protein
cg2_3.0_scaffold_3077_c_2
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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1320..2045
DNA (726bp) protein (242aa)
gidB; ribosomal RNA small subunit methyltransferase G (EC:2.1.1.170) Tax=CG_Dehalo_01
gidB; 16S rRNA methyltransferase GidB; K03501 glucose inhibited division protein B [EC:2.1.-.-] id=1241409 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
16S rRNA methyltransferase
cg2_3.0_scaffold_3077_c_3
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

2182..2367
DNA (186bp) protein (62aa)
hypothetical protein Tax=CG_Dehalo_01
coiled-coil 29..61 id=1241410 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_3077_c_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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2549..3433
DNA (885bp) protein (295aa)
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] Tax=CG_Dehalo_01
det:DET0380 pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] id=1241418 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
pyridoxal biosynthesis protein
cg2_3.0_scaffold_3077_c_5
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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3515..5005
DNA (1491bp) protein (497aa)
R3H domain-containing protein Tax=CG_Dehalo_01
dly:Dehly_0874 single-stranded nucleic acid-binding R3H domain-containing protein id=1241419 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
R3H domain-containing protein
cg2_3.0_scaffold_3077_c_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

5005..5640
DNA (636bp) protein (212aa)
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=CG_Dehalo_01
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] id=1241420 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
tmk; thymidylate kinase
cg2_3.0_scaffold_3077_c_7
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

5695..6918
DNA (1224bp) protein (408aa)
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=CG_Dehalo_01
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Selenomonas noxia F0398 RepID=G5H1I7_9FIRM rbh
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
cg2_3.0_scaffold_3077_c_8
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

6893..7531
DNA (639bp) protein (213aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Dehalo_01
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=1241423 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rnhB; ribonuclease HII (EC:3.1.26.4)
cg2_3.0_scaffold_3077_c_9
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

7544..7909
DNA (366bp) protein (122aa)
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein; K07460 putative endonuclease id=1241426 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_3077_c_10
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(7917..8312)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=2 Tax=Thermaerobacter RepID=E4M526_9FIRM id=1241999 bin=RBG2 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi rbh
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Dehalo_01
30S ribosomal protein S9
cg2_3.0_scaffold_3077_c_11
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(8305..8793)
DNA (489bp) protein (163aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=CG_Dehalo_01
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=1242000 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rplM; 50S ribosomal protein L13
cg2_3.0_scaffold_3077_c_12
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(8790..9608)
DNA (819bp) protein (273aa)
truA; tRNA pseudouridine synthase A (EC:4.2.1.70); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=CG_Dehalo_01
truA; tRNA pseudouridine synthase A (EC:4.2.1.70); K06173 tRNA pseudouridine synthase A [EC:5.4.99.12] id=1242001 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
tRNA pseudouridine synthase A
cg2_3.0_scaffold_3077_c_13
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(9635..9988)
DNA (354bp) protein (118aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=CG_Dehalo_01
ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=1242002 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
50S ribosomal protein L17
cg2_3.0_scaffold_3077_c_14
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(9985..10920)
DNA (936bp) protein (312aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=CG_Dehalo_01
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=1242003 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
cg2_3.0_scaffold_3077_c_15
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(10928..11560)
DNA (633bp) protein (211aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Dehalo_01
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=1242004 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
30S ribosomal protein S4
cg2_3.0_scaffold_3077_c_16
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(11563..11955)
DNA (393bp) protein (131aa)
rpsK; 30S ribosomal protein S11 Tax=CG_Dehalo_01
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=1242005 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rpsK; 30S ribosomal protein S11
cg2_3.0_scaffold_3077_c_17
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(12006..12395)
DNA (390bp) protein (130aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CG_Dehalo_01
rpsM; ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=1243618 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
30S ribosomal protein S13
cg2_3.0_scaffold_3077_c_18
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(12588..12806)
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=CG_Dehalo_01
translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=1242007 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
infA; translation initiation factor IF-1
cg2_3.0_scaffold_3077_c_19
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(12823..13560)
DNA (738bp) protein (246aa)
map; methionine aminopeptidase (EC:3.4.11.18) Tax=CG_Dehalo_01
map; methionine aminopeptidase, type I (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] id=1242008 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
map; methionine aminopeptidase (EC:3.4.11.18)
cg2_3.0_scaffold_3077_c_20
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13586..14269)
DNA (684bp) protein (228aa)
nucleoside-triphosphate--adenylate kinase (EC:2.7.4.10); K00939 adenylate kinase [EC:2.7.4.3] Tax=CG_Dehalo_01
nucleoside-triphosphate--adenylate kinase (EC:2.7.4.10)
Adenylate kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THC3_9CHLR id=1242009 bin=RBG2 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_3077_c_21
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(14469..15785)
DNA (1317bp) protein (439aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=CG_Dehalo_01
det:DET0494 secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=1242010 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
preprotein translocase subunit SecY
cg2_3.0_scaffold_3077_c_22
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(15787..16230)
DNA (444bp) protein (148aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=CG_Dehalo_01
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=1242011 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
50S ribosomal protein L15
cg2_3.0_scaffold_3077_c_23
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(16217..16753)
DNA (537bp) protein (179aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=CG_Dehalo_01
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=1243459 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
30S ribosomal protein S5
cg2_3.0_scaffold_3077_c_24
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(16750..17115)
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y971_COPPD id=1242013 bin=RBG2 species=Coprothermobacter proteolyticus genus=Coprothermobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi rbh
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=CG_Dehalo_01
rplR; 50S ribosomal protein L18
cg2_3.0_scaffold_3077_c_25
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(17128..17679)
DNA (552bp) protein (184aa)
50S ribosomal protein L6 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9L3_9BACI id=1242014 bin=RBG2 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi rbh
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=CG_Dehalo_01
50S ribosomal protein L6
cg2_3.0_scaffold_3077_c_26
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


comp(17702..18094)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=2 Tax=Roseiflexus RepID=RS8_ROSCS id=1242015 bin=RBG2 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=CG_Dehalo_01
rpsH; 30S ribosomal protein S8
Displaying 26 items

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