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cg2_3.0_scaffold_1949_c

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1949_c_1
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(2..595)
DNA (594bp) protein (198aa)
nfi; endonuclease V (EC:3.1.21.7); K05982 deoxyribonuclease V [EC:3.1.21.7] Tax=CG_Dehalo_01
nfi; nfi endonuclease V; K05982 deoxyribonuclease V [EC:3.1.21.7] id=1241930 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
Endonuclease V (EC:3.1.21.-)
cg2_3.0_scaffold_1949_c_2
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

642..1211
DNA (570bp) protein (190aa)
rhomboid family protein Tax=CG_Dehalo_01
rhomboid family protein id=1242719 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
rhomboid family protein
cg2_3.0_scaffold_1949_c_trna_1
unknown

Not on your lists

1352..1424
DNA (73bp)
transferRNA
cg2_3.0_scaffold_1949_c_trna_2
unknown

Not on your lists

1438..1511
DNA (74bp)
transferRNA
cg2_3.0_scaffold_1949_c_3
unknown

Not on your lists

1738..1851
DNA (114bp) protein (38aa)

This feature has no annotations

cg2_3.0_scaffold_1949_c_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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2587..2808
DNA (222bp) protein (74aa)
UPI0003D1C34B related cluster n=1 Tax=unknown RepID=UPI0003D1C34B rbh
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_1949_c_5
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

2805..3038
DNA (234bp) protein (78aa)
putative periplasmic or secreted lipoprotein Tax=CG_Dehalo_01
putative periplasmic or secreted lipoprotein
cg2_3.0_scaffold_1949_c_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

3246..3461
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIV1_DESAR rbh
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein
cg2_3.0_scaffold_1949_c_7
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

4066..4230
DNA (165bp) protein (55aa)
hypothetical protein Tax=CG_Dehalo_01
cg2_3.0_scaffold_1949_c_8
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(4482..5366)
DNA (885bp) protein (295aa)
methylenetetrahydrofolate reductase Tax=CG_Dehalo_01
dal:Dalk_2561 methylenetetrahydrofolate reductase id=1241378 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
methylenetetrahydrofolate reductase
cg2_3.0_scaffold_1949_c_9
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(5383..6024)
DNA (642bp) protein (214aa)
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein id=1241377 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_1949_c_10
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(6037..9117)
DNA (3081bp) protein (1027aa)
respiratory-chain NADH dehydrogenase domain 51 kDa subunit Tax=CG_Dehalo_01
dal:Dalk_2559 respiratory-chain NADH dehydrogenase domain 51 kDa subunit id=1241375 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
cg2_3.0_scaffold_1949_c_11
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(9119..9604)
DNA (486bp) protein (162aa)
NADH dehydrogenase (ubiquinone) 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=CG_Dehalo_01
NADH dehydrogenase (ubiquinone) 24 kDa subunit; K00334 NADH dehydrogenase I subunit E [EC:1.6.5.3] id=1241374 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
NADH dehydrogenase (ubiquinone) 24 kDa subunit
cg2_3.0_scaffold_1949_c_12
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(9573..12311)
DNA (2739bp) protein (913aa)
fdhA; NAD-dependent formate dehydrogenase subunit alpha, selenocysteine-containing (EC:1.2.1.2); K05299 formate dehydrogenase alpha subunit [EC:1.2.1.43] Tax=CG_Dehalo_01
fdhA; NAD-dependent formate dehydrogenase, alpha subunit, selenocysteine-containing (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=1241373 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
fdhA; NAD-dependent formate dehydrogenase subunit alpha, selenocysteine-containing (EC:1.2.1.2)
cg2_3.0_scaffold_1949_c_13
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(12361..13149)
DNA (789bp) protein (263aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEY0_9BACT id=1241372 bin=RBG2 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG2 organism_group=Chloroflexi rbh
LuxR family transcriptional regulator Tax=CG_Dehalo_01
LuxR family transcriptional regulator
cg2_3.0_scaffold_1949_c_14
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13428..14081)
DNA (654bp) protein (218aa)
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Tax=CG_Dehalo_01
hypothetical protein id=1241371 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
cg2_3.0_scaffold_1949_c_15
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(14050..15306)
DNA (1257bp) protein (419aa)
hypothetical protein Tax=CG_Dehalo_01
hypothetical protein id=1241370 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_1949_c_16
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(15773..16606)
DNA (834bp) protein (278aa)
panC; pantoate--beta-alanine ligase; K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=CG_Dehalo_01
sti:Sthe_0699 pantoate/beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] id=1241855 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
panC; pantoate--beta-alanine ligase
cg2_3.0_scaffold_1949_c_17
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(16621..17478)
DNA (858bp) protein (286aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=CG_Dehalo_01
deg:DehalGT_0688 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] id=1241854 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
3-methyl-2-oxobutanoate hydroxymethyltransferase
cg2_3.0_scaffold_1949_c_18
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(17454..17900)
DNA (447bp) protein (149aa)
aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11] Tax=CG_Dehalo_01
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8JZZ6_DEHLB id=1241853 bin=RBG2 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_1949_c_19
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(17902..18762)
DNA (861bp) protein (287aa)
pyrroline-5-carboxylate reductase Tax=CG_Dehalo_01
cbdbA779; hypothetical protein id=1241852 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
pyrroline-5-carboxylate reductase
cg2_3.0_scaffold_1949_c_20
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(18759..19715)
DNA (957bp) protein (319aa)
Peptidase S58 DmpA n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJ54_SYNLT rbh
peptidase S58 DmpA Tax=CG_Dehalo_01
peptidase S58 DmpA
cg2_3.0_scaffold_1949_c_21
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(19881..20669)
DNA (789bp) protein (263aa)
surE; stationary-phase survival protein; K03787 5'-nucleotidase [EC:3.1.3.5] Tax=CG_Dehalo_01
surE; stationary-phase survival protein (EC:3.1.3.5)
Stationary-phase survival protein n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QB41_9CHLR rbh
Displaying 23 items

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