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cg2_3.0_scaffold_2042_c

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2042_c_1
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204..854)
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FGH4_DESAA rbh
TetR family transcriptional regulator Tax=CG_Delta_05
TetR family transcriptional regulator
cg2_3.0_scaffold_2042_c_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1028..2437
DNA (1410bp) protein (470aa)
glutamyl glutaminyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=CG_Delta_05
glutamyl glutaminyl-tRNA synthetase
cg2_3.0_scaffold_2042_c_3
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2522..3634
DNA (1113bp) protein (371aa)
menaquinone biosynthesis protein Tax=CG_Delta_05
menaquinone biosynthesis protein
cg2_3.0_scaffold_2042_c_4
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3887..5284)
DNA (1398bp) protein (466aa)
Putative ATP-dependent RNA helicase with P-loop hydrolase domain (RhlE gene) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJS0_9BACT rbh
ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene) Tax=CG_Delta_05
ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene)
cg2_3.0_scaffold_2042_c_5
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5793..6443
DNA (651bp) protein (217aa)
Metal-dependent phosphoesterase, PHP family n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A593_PELCD rbh
hypothetical protein Tax=CG_Delta_05
hypothetical protein
cg2_3.0_scaffold_2042_c_6
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6435..6833)
DNA (399bp) protein (133aa)
mcmA2; methylmalonyl-CoA mutase subunit alpha; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=CG_Delta_05
methylmalonyl-CoA mutase C-terminal domain protein (EC:5.4.99.2)
methylmalonyl-CoA mutase n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00037ABF3B
cg2_3.0_scaffold_2042_c_7
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6854..8533)
DNA (1680bp) protein (560aa)
methylmalonyl-CoA mutase, N-domain/subunit; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=CG_Delta_05
Methylmalonyl-CoA mutase, N-domain/subunit n=1 Tax=Thermosipho africanus (strain TCF52B) RepID=B7IEZ8_THEAB
methylmalonyl-CoA mutase, N-domain/subunit
cg2_3.0_scaffold_2042_c_8
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8886..9923
DNA (1038bp) protein (346aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-); K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=CG_Delta_05
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
cg2_3.0_scaffold_2042_c_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9977..11104
DNA (1128bp) protein (376aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=CG_Delta_05
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
cg2_3.0_scaffold_2042_c_10
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11244..11561
DNA (318bp) protein (106aa)
protein translocase subunit; K03210 preprotein translocase subunit YajC Tax=CG_Delta_05
protein translocase subunit
cg2_3.0_scaffold_2042_c_11
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11589..13187
DNA (1599bp) protein (533aa)
Protein translocase subunit SecD n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVH4_SYNAS rbh
protein translocase subunit; K03072 preprotein translocase subunit SecD Tax=CG_Delta_05
protein translocase subunit
cg2_3.0_scaffold_2042_c_12
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13209..14123
DNA (915bp) protein (305aa)
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=CG_Delta_05
secF; preprotein translocase subunit SecF
cg2_3.0_scaffold_2042_c_13
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14125..14637
DNA (513bp) protein (171aa)
hypothetical protein; K09793 hypothetical protein Tax=CG_Delta_05
hypothetical protein
cg2_3.0_scaffold_2042_c_14
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14649..15260
DNA (612bp) protein (204aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=CG_Delta_05
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVH9_SYNAS rbh
cg2_3.0_scaffold_2042_c_15
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15344..17368)
DNA (2025bp) protein (675aa)
Amino acid transporter n=1 Tax=Desulfovibrio sp. U5L RepID=I2PXI4_9DELT rbh
hypothetical protein Tax=CG_Delta_05
Amino acid permease
cg2_3.0_scaffold_2042_c_16
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17376..18653)
DNA (1278bp) protein (426aa)
manganese transporter NRAMP Tax=CG_Delta_05
manganese transporter NRAMP
cg2_3.0_scaffold_2042_c_17
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18678..19940)
DNA (1263bp) protein (421aa)
Mg2+/Co2+ transporter Tax=CG_Delta_05
Mg2+/Co2+ transporter
cg2_3.0_scaffold_2042_c_18
unknown

Not on your lists

20151..20216
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 18 items

View Taxonomy
NameRatio
CG_Delta_05
94.44%
unknown
5.56%
CG_Delta_05: 0.9444444444444444unknown: 0.05555555555555555CG_Delta_05