ggKbase home page

cg2_3.0_scaffold_6317_c

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_6317_c_1
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..135
DNA (135bp) protein (45aa)
Tax=CG_Solirubrobact_01
cg2_3.0_scaffold_6317_c_2
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

535..1251
DNA (717bp) protein (239aa)
hypothetical protein Tax=CG_Solirubrobact_01
hypothetical protein
cg2_3.0_scaffold_6317_c_3
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1372..1791
DNA (420bp) protein (140aa)
CcmE/CycJ protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDD7_9CHLR rbh
hypothetical protein; K02197 cytochrome c-type biogenesis protein CcmE Tax=CG_Solirubrobact_01
hypothetical protein
cg2_3.0_scaffold_6317_c_4
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1795..3888
DNA (2094bp) protein (698aa)
Cytochrome c biogenesis factor n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N4I6_SLAHD rbh
cytochrome c biogenesis factor; K02198 cytochrome c-type biogenesis protein CcmF Tax=CG_Solirubrobact_01
cytochrome c biogenesis factor
cg2_3.0_scaffold_6317_c_5
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3950..4660
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YW48_9ACTN rbh
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=CG_Solirubrobact_01
ABC transporter-like protein
cg2_3.0_scaffold_6317_c_6
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4660..5343
DNA (684bp) protein (228aa)
ABC-type transport system involved in cytochrome c biogenesis, permease component n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N4I8_SLAHD rbh
cytochrome c biogenesis ABC transporter permease; K02194 heme exporter protein B Tax=CG_Solirubrobact_01
cytochrome c biogenesis ABC transporter permease
cg2_3.0_scaffold_6317_c_7
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5346..6032
DNA (687bp) protein (229aa)
cytochrome c assembly protein; K02195 heme exporter protein C Tax=CG_Solirubrobact_01
cytochrome C assembly protein
cg2_3.0_scaffold_6317_c_8
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6037..6186
DNA (150bp) protein (50aa)
Tax=CG_Solirubrobact_01
cg2_3.0_scaffold_6317_c_9
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6227..7111
DNA (885bp) protein (295aa)
cytochrome C biogenesis protein CcsB Tax=CG_Solirubrobact_01
cytochrome c-type biogenesis protein CcsB
cg2_3.0_scaffold_6317_c_10
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7115..7738
DNA (624bp) protein (208aa)
siroheme synthase (EC:1.3.1.76); K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] Tax=CG_Solirubrobact_01
siroheme synthase (EC:1.3.1.76)
Siroheme synthase n=1 Tax=Heliobacillus mobilis RepID=Q0PIF4_HELMO rbh
cg2_3.0_scaffold_6317_c_11
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7729..9069
DNA (1341bp) protein (447aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=CG_Solirubrobact_01
glutamyl-tRNA reductase
cg2_3.0_scaffold_6317_c_12
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9074..10057
DNA (984bp) protein (328aa)
porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=CG_Solirubrobact_01
Porphobilinogen deaminase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIX9_DESK7 rbh
porphobilinogen deaminase
cg2_3.0_scaffold_6317_c_13
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10516..12063
DNA (1548bp) protein (516aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=CG_Solirubrobact_01
Uroporphyrin-III C-methyltransferase n=1 Tax=Thermincola potens (strain JR) RepID=D5XEC9_THEPJ rbh
uroporphyrin-III C-methyltransferase
cg2_3.0_scaffold_6317_c_14
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12079..13053
DNA (975bp) protein (325aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=CG_Solirubrobact_01
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACT1_CARHZ rbh
cg2_3.0_scaffold_6317_c_15
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13083..14249
DNA (1167bp) protein (389aa)
Putative heme d1 biosynthesis radical SAM protein NirJ2 n=1 Tax=Slackia sp. CM382 RepID=J6IE71_9ACTN rbh
Fe-S oxidoreductase Tax=CG_Solirubrobact_01
Fe-S oxidoreductase
cg2_3.0_scaffold_6317_c_16
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14598..15893
DNA (1296bp) protein (432aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=CG_Solirubrobact_01
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIX2_DESK7 rbh
cg2_3.0_scaffold_6317_c_17
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15940..16734)
DNA (795bp) protein (265aa)
glucose-6-phosphate isomerase; K06859 glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] Tax=CG_Solirubrobact_01
glucose-6-phosphate isomerase, archaeal (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGH8_9FIRM rbh
cg2_3.0_scaffold_6317_c_18
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16910..17878)
DNA (969bp) protein (323aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Solirubrobact_01
dTDP-glucose 4,6-dehydratase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWB4_9BACT rbh
dTDP-glucose 4,6-dehydratase
cg2_3.0_scaffold_6317_c_19
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18370..18825)
DNA (456bp) protein (152aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_Solirubrobact_01
rfbC; dTDP-4-dehydrorhamnose 3,5 epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S8J4_9EURY rbh
cg2_3.0_scaffold_6317_c_20
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18904..19968)
DNA (1065bp) protein (355aa)
strD; glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) (EC:2.7.7.24) Tax=CG_Solirubrobact_01
strD; glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) (EC:2.7.7.24)
cg2_3.0_scaffold_6317_c_21
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20100..20945
DNA (846bp) protein (282aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KAS9_HALHC rbh
dTDP-4-dehydrorhamnose reductase Tax=CG_Solirubrobact_01
dTDP-4-dehydrorhamnose reductase
cg2_3.0_scaffold_6317_c_22
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20960..21844
DNA (885bp) protein (295aa)
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=CG_Solirubrobact_01
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YA64_DICT6 rbh
UTP-glucose-1-phosphate uridylyltransferase
cg2_3.0_scaffold_6317_c_23
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21978..22454
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AG21_9PROT rbh
hypothetical protein Tax=CG_Solirubrobact_01
hypothetical protein
cg2_3.0_scaffold_6317_c_24
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22460..22711)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D5Z3_DESAJ rbh
hypothetical protein Tax=CG_Solirubrobact_01
hypothetical protein
Displaying 24 items

View Taxonomy