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cg2_3.0_scaffold_3339_c

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3339_c_1
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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1..180
DNA (180bp) protein (60aa)
Tax=CG_Solirubrobact_01
cg2_3.0_scaffold_3339_c_2
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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237..1541
DNA (1305bp) protein (435aa)
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=CG_Solirubrobact_01
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRQ2_ACEAZ rbh
cg2_3.0_scaffold_3339_c_3
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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1575..2858
DNA (1284bp) protein (428aa)
Homoserine dehydrogenase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBQ7_HALHC rbh
homoserine dehydrogenase Tax=CG_Solirubrobact_01
homoserine dehydrogenase
cg2_3.0_scaffold_3339_c_4
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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2862..3911
DNA (1050bp) protein (350aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=CG_Solirubrobact_01
Threonine synthase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3M3_THEA1 rbh
threonine synthase
cg2_3.0_scaffold_3339_c_5
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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3926..4837
DNA (912bp) protein (304aa)
thrB; homoserine kinase ThrB (EC:2.7.1.39) Tax=CG_Solirubrobact_01
thrB; homoserine kinase ThrB (EC:2.7.1.39)
Homoserine kinase n=12 Tax=Clostridium difficile RepID=T2TJE2_CLODI rbh
cg2_3.0_scaffold_3339_c_6
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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5060..5869
DNA (810bp) protein (270aa)
Metallophosphoesterase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF9_RUBXD rbh
metallophosphoesterase Tax=CG_Solirubrobact_01
metallophosphoesterase
cg2_3.0_scaffold_3339_c_7
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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5821..7251
DNA (1431bp) protein (477aa)
cyclic 2,3-diphosphoglycerate-synthetase; K05716 cyclic 2,3-diphosphoglycerate synthetase [EC:4.6.1.-] Tax=CG_Solirubrobact_01
Cyclic 2,3-diphosphoglycerate synthetase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=CPGS_METKA rbh
cyclic 2,3-diphosphoglycerate-synthetase
cg2_3.0_scaffold_3339_c_8
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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7217..8224
DNA (1008bp) protein (336aa)
2-phosphoglycerate kinase; K05715 2-phosphoglycerate kinase [EC:2.7.2.-] Tax=CG_Solirubrobact_01
2-phosphoglycerate kinase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U8V0_OCEP5 rbh
2-phosphoglycerate kinase
cg2_3.0_scaffold_3339_c_9
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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8238..8900
DNA (663bp) protein (221aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2] Tax=CG_Solirubrobact_01
transaldolase n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00037F31BA rbh
transaldolase
cg2_3.0_scaffold_3339_c_10
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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9035..10426
DNA (1392bp) protein (464aa)
Transcription termination factor Rho n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVG2_RUBXD rbh
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=CG_Solirubrobact_01
rho; transcription termination factor Rho
cg2_3.0_scaffold_3339_c_11
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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10697..10990
DNA (294bp) protein (98aa)
Ribosomal protein L31 n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CJD4_9ACTN rbh
RpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=CG_Solirubrobact_01
50S ribosomal protein L31
cg2_3.0_scaffold_3339_c_12
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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11006..11965
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037D05BD rbh
hypothetical protein Tax=CG_Solirubrobact_01
conserved membrane protein of unknown function
cg2_3.0_scaffold_3339_c_13
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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12198..13265
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RF1_MOOTA rbh
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=CG_Solirubrobact_01
prfA; peptide chain release factor 1
cg2_3.0_scaffold_3339_c_14
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13278..14162
DNA (885bp) protein (295aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=CG_Solirubrobact_01
Release factor glutamine methyltransferase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZF8_CLOCD rbh
protein-(glutamine-N5) methyltransferase
cg2_3.0_scaffold_3339_c_15
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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14164..14829
DNA (666bp) protein (222aa)
Putative translation factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67TD3_SYMTH rbh
translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Solirubrobact_01
translation factor
cg2_3.0_scaffold_3339_c_16
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15016..15465
DNA (450bp) protein (150aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6) Tax=CG_Solirubrobact_01
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000376BC3D rbh
cg2_3.0_scaffold_3339_c_17
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15469..16719
DNA (1251bp) protein (417aa)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=CG_Solirubrobact_01
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PBK6_DEFDS rbh
cg2_3.0_scaffold_3339_c_18
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16731..17183
DNA (453bp) protein (151aa)
CMP/dCMP deaminase zinc-binding protein; K01493 dCMP deaminase [EC:3.5.4.12] Tax=CG_Solirubrobact_01
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTZ3_ACEAZ rbh
CMP/dCMP deaminase zinc-binding protein
cg2_3.0_scaffold_3339_c_19
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17296..17709
DNA (414bp) protein (138aa)
Tax=CG_Solirubrobact_01
cg2_3.0_scaffold_3339_c_20
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17693..18103
DNA (411bp) protein (137aa)
Tax=CG_Solirubrobact_01
cg2_3.0_scaffold_3339_c_21
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18141..18950
DNA (810bp) protein (270aa)
ATP synthase subunit a n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z310_MELRP rbh
F0F1 ATP synthase subunit A Tax=CG_Solirubrobact_01
F0F1 ATP synthase subunit A
cg2_3.0_scaffold_3339_c_22
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19015..19239
DNA (225bp) protein (75aa)
atpE; ATP synthase subunit C (EC:3.6.3.14) Tax=CG_Solirubrobact_01
atpE; ATP synthase subunit C (EC:3.6.3.14)
Putative ATP synthase C chain n=1 Tax=uncultured bacterium CBNPD1 BAC clone 2089 RepID=B1N6P8_9BACT rbh
cg2_3.0_scaffold_3339_c_23
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19297..19782
DNA (486bp) protein (162aa)
ATP synthase F0 subunit beta; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=CG_Solirubrobact_01
ATP synthase subunit b n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=ATPF_ANASK rbh
ATP synthase F0 subunit beta
cg2_3.0_scaffold_3339_c_24
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19782..20321
DNA (540bp) protein (180aa)
ATP synthase F1 subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=CG_Solirubrobact_01
ATP synthase subunit delta n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CAW1_9CLOT rbh
ATP synthase F1 subunit delta
cg2_3.0_scaffold_3339_c_25
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20333..21850
DNA (1518bp) protein (506aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=CG_Solirubrobact_01
ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Thermincola potens (strain JR) RepID=D5XDH5_THEPJ rbh
cg2_3.0_scaffold_3339_c_26
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21868..22755
DNA (888bp) protein (296aa)
ATP synthase F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=CG_Solirubrobact_01
ATP synthase gamma chain n=2 Tax=Eggerthella RepID=E5X6Q0_9ACTN rbh
ATP synthase F1 subcomplex gamma subunit
cg2_3.0_scaffold_3339_c_27
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22988..24394
DNA (1407bp) protein (469aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=CG_Solirubrobact_01
F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=ATPB_MOOTA rbh
cg2_3.0_scaffold_3339_c_28
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24430..24846
DNA (417bp) protein (139aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=CG_Solirubrobact_01
F0F1 ATP synthase subunit epsilon n=1 Tax=Brevibacillus sp. phR RepID=UPI00036046B2 rbh
atpC; F-ATPase epsilon subunit AtpC
cg2_3.0_scaffold_3339_c_29
unknown

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comp(24818..24955)
DNA (138bp) protein (46aa)

This feature has no annotations

cg2_3.0_scaffold_3339_c_30
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25076..26065
DNA (990bp) protein (330aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7) Tax=CG_Solirubrobact_01
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UPI00039CA524 related cluster n=1 Tax=unknown RepID=UPI00039CA524 rbh
Displaying 30 items

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