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cg2_3.0_scaffold_1012_c

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1012_c_trna_1
unknown

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312..393
DNA (82bp)
transferRNA
cg2_3.0_scaffold_1012_c_1
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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439..1848
DNA (1410bp) protein (470aa)
trigger factor; K03545 trigger factor Tax=CG_Solirubrobact_01
trigger factor
cg2_3.0_scaffold_1012_c_2
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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1887..2492
DNA (606bp) protein (202aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=CG_Solirubrobact_01
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B522C7 rbh
cg2_3.0_scaffold_1012_c_3
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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2504..3781
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LF34_THEPS rbh
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX Tax=CG_Solirubrobact_01
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
cg2_3.0_scaffold_1012_c_4
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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3827..4009
DNA (183bp) protein (61aa)
Tax=CG_Solirubrobact_01
cg2_3.0_scaffold_1012_c_5
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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4362..7001
DNA (2640bp) protein (880aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Solirubrobact_01
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D455_PELTS rbh
cg2_3.0_scaffold_1012_c_6
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7408..8730
DNA (1323bp) protein (441aa)
dihydrofolate synthase / Folylpolyglutamate synthase (EC:6.3.2.12) Tax=CG_Solirubrobact_01
dihydrofolate synthase / Folylpolyglutamate synthase (EC:6.3.2.12)
Folylpolyglutamate synthase n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3BE46_STRMB rbh
cg2_3.0_scaffold_1012_c_7
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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8835..9275
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVT3_RUBXD rbh
hypothetical protein Tax=CG_Solirubrobact_01
hypothetical protein
cg2_3.0_scaffold_1012_c_8
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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9424..9840
DNA (417bp) protein (139aa)
Nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=CG_Solirubrobact_01
UPI00034F2333 related cluster n=1 Tax=unknown RepID=UPI00034F2333 rbh
nucleoside diphosphate kinase
cg2_3.0_scaffold_1012_c_9
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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10119..10478
DNA (360bp) protein (120aa)
putative NADH-quinone oxidoreductase subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=CG_Solirubrobact_01
NADH-quinone oxidoreductase subunit A n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6A5A4 rbh
putative NADH-quinone oxidoreductase subunit A
cg2_3.0_scaffold_1012_c_10
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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10469..10993
DNA (525bp) protein (175aa)
NADH dehydrogenase subunit B (EC:1.6.99.5 1.6.5.3); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=CG_Solirubrobact_01
NADH dehydrogenase subunit B (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase subunit B n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMH3_THEM7 rbh
cg2_3.0_scaffold_1012_c_11
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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10993..11607
DNA (615bp) protein (205aa)
NADH dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=CG_Solirubrobact_01
NADH dehydrogenase I subunit C n=1 Tax=uncultured prokaryote RepID=H5SP98_9ZZZZ rbh
NADH dehydrogenase subunit C
cg2_3.0_scaffold_1012_c_12
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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11585..12793
DNA (1209bp) protein (403aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=CG_Solirubrobact_01
NADH dehydrogenase I subunit D (EC:1.6.99.5)
cg2_3.0_scaffold_1012_c_13
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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12793..13803
DNA (1011bp) protein (337aa)
respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=CG_Solirubrobact_01
respiratory-chain NADH dehydrogenase subunit 1
cg2_3.0_scaffold_1012_c_14
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13820..14299
DNA (480bp) protein (160aa)
NADH-quinone oxidoreductase subunit I; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=CG_Solirubrobact_01
NADH-quinone oxidoreductase subunit I n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMH7_THEM7 rbh
NADH-quinone oxidoreductase subunit I
cg2_3.0_scaffold_1012_c_15
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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14304..14798
DNA (495bp) protein (165aa)
ndhG; NADH dehydrogenase subunit J (EC:1.6.5.3); K05578 NAD(P)H-quinone oxidoreductase subunit 6 [EC:1.6.5.3] Tax=CG_Solirubrobact_01
ndhG; NADH dehydrogenase subunit J (EC:1.6.5.3)
NADH dehydrogenase subunit 6 n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DL30_THEEB rbh
cg2_3.0_scaffold_1012_c_16
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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14798..15109
DNA (312bp) protein (104aa)
NAD(P)H-quinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=CG_Solirubrobact_01
NADH-quinone oxidoreductase subunit K n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNH7_DESK7 rbh
NAD(P)H-quinone oxidoreductase subunit 4L
cg2_3.0_scaffold_1012_c_17
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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15123..16958
DNA (1836bp) protein (612aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=CG_Solirubrobact_01
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
cg2_3.0_scaffold_1012_c_18
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16971..18437
DNA (1467bp) protein (489aa)
nuoM; proton-translocating NAD(P)H-quinone oxidoreductase, chain M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=CG_Solirubrobact_01
nuoM; proton-translocating NAD(P)H-quinone oxidoreductase subunit M
cg2_3.0_scaffold_1012_c_19
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18438..19868
DNA (1431bp) protein (477aa)
proton-translocating NADH-quinone oxidoreductase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=CG_Solirubrobact_01
proton-translocating NADH-quinone oxidoreductase subunit N
cg2_3.0_scaffold_1012_c_20
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19894..20109
DNA (216bp) protein (72aa)
Tax=CG_Solirubrobact_01
cg2_3.0_scaffold_1012_c_21
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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comp(20489..20689)
DNA (201bp) protein (67aa)
Sec-independent protein translocase protein TatA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNP7_9FIRM rbh
tatA; twin-arginine translocation protein TatA Tax=CG_Solirubrobact_01
tatA; twin-arginine translocation protein TatA
cg2_3.0_scaffold_1012_c_22
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20903..21109)
DNA (207bp) protein (69aa)
Cold shock protein ,beta-ribbon, CspA family n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUW6_9BACT
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=CG_Solirubrobact_01
cold-shock DNA-binding domain-containing protein
cg2_3.0_scaffold_1012_c_23
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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comp(21319..22134)
DNA (816bp) protein (272aa)
hypothetical protein Tax=CG_Solirubrobact_01
ABC-2 type transporter id=15189352 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage) rbh
hypothetical protein
cg2_3.0_scaffold_1012_c_24
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22124..23020)
DNA (897bp) protein (299aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4N5_SPHTD rbh
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=CG_Solirubrobact_01
ABC transporter
cg2_3.0_scaffold_1012_c_25
GWC2_SYX_53_9_curated, Bacteria

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comp(23076..23300)
DNA (225bp) protein (75aa)
Nodulation protein J n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IEE7_9FIRM rbh
ABC transporter; K09694 lipooligosaccharide transport system permease protein Tax=GWC2_SYX_53_9_curated
ABC transporter
cg2_3.0_scaffold_1012_c_26
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23509..25782
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JI48_HALH3
hypothetical protein Tax=CG_Solirubrobact_01
hypothetical protein
cg2_3.0_scaffold_1012_c_27
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25863..26438)
DNA (576bp) protein (192aa)
Tax=CG_Solirubrobact_01
cg2_3.0_scaffold_1012_c_28
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26797..27051
DNA (255bp) protein (85aa)
phage-shock protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003B5B228 rbh
phage shock protein C Tax=CG_Solirubrobact_01
phage shock protein C
cg2_3.0_scaffold_1012_c_29
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27176..28492
DNA (1317bp) protein (439aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-); K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=CG_Solirubrobact_01
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
Displaying 30 items

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