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cg2_3.0_scaffold_3860_c

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3860_c_1
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..993
DNA (993bp) protein (331aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC12851.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
cg2_3.0_scaffold_3860_c_2
unknown

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998..1720
DNA (723bp) protein (241aa)

This feature has no annotations

cg2_3.0_scaffold_3860_c_3
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1734..2240
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PUM9_PSEUV rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV37561.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp.
cg2_3.0_scaffold_3860_c_4
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2282..3478
DNA (1197bp) protein (399aa)
Putative phage tail sheath protein FI n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JLQ7_9RHIZ rbh
Putative phage tail sheath protein FI {ECO:0000313|EMBL:ELT47715.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactr
phage tail sheath protein
cg2_3.0_scaffold_3860_c_5
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3491..4018
DNA (528bp) protein (176aa)
Phage tail tube protein FII-like protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JVX6_9RHIZ rbh
Phage tail tube protein FII-like protein {ECO:0000313|EMBL:ELT47716.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochroba
Phage tail tube protein FII-like protein
cg2_3.0_scaffold_3860_c_6
unknown

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4085..4450
DNA (366bp) protein (122aa)

This feature has no annotations

cg2_3.0_scaffold_3860_c_7
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4569..7004
DNA (2436bp) protein (812aa)
Phage-related tail protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P3T2_9RHOB rbh
Transglycosylase {ECO:0000313|EMBL:KEO53398.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 101
phage-related tail protein
cg2_3.0_scaffold_3860_c_8
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7004..7426
DNA (423bp) protein (141aa)
Fels-2 prophage protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JLR0_9RHIZ rbh
Fels-2 prophage protein {ECO:0000313|EMBL:ELT47720.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium
phage tail assembly protein
cg2_3.0_scaffold_3860_c_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7423..7647
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL31745.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cg2_3.0_scaffold_3860_c_10
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7651..8652
DNA (1002bp) protein (334aa)
Phage late control D family protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JLW7_9RHIZ rbh
Methylobacterium aquaticum plasmid pMaq22A_4p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ50407.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Meth
late control D family protein
cg2_3.0_scaffold_3860_c_11
unknown

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8662..9105
DNA (444bp) protein (148aa)

This feature has no annotations

cg2_3.0_scaffold_3860_c_12
unknown

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9095..9244
DNA (150bp) protein (50aa)

This feature has no annotations

cg2_3.0_scaffold_3860_c_13
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9258..9944
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D4U8_9RHIZ rbh
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:EDQ33965.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;"
peptidoglycan-binding domain 1 protein
cg2_3.0_scaffold_3860_c_14
unknown

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9946..10296
DNA (351bp) protein (117aa)

This feature has no annotations

cg2_3.0_scaffold_3860_c_15
unknown

Not on your lists

10557..10775
DNA (219bp) protein (73aa)

This feature has no annotations

cg2_3.0_scaffold_3860_c_16

Not on your lists

comp(10795..11169)
DNA (375bp) protein (125aa)
Nuclease n=1 Tax=Emiliania huxleyi virus PS401 RepID=G8DH70_9VIRU rbh
Nuclease {ECO:0000313|EMBL:AET73317.1}; TaxID=754068 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses.;" source="Emiliania huxleyi virus PS401.;"
nuclease SNase-like protein
cg2_3.0_scaffold_3860_c_17
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11436..12488)
DNA (1053bp) protein (351aa)
Possible integrase/recombinase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSC1_9RHOB rbh
Possible integrase/recombinase {ECO:0000313|EMBL:EDM71087.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter
phage integrase family protein
cg2_3.0_scaffold_3860_c_18
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12491..12664)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:EDM71086.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. Az
cg2_3.0_scaffold_3860_c_19
unknown

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comp(12835..13278)
DNA (444bp) protein (148aa)

This feature has no annotations

cg2_3.0_scaffold_3860_c_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13271..14146)
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JEA3_OLICO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07131.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
Displaying 20 items

View Taxonomy