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cg2_3.0_scaffold_9298_c

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_9298_c_1
Loktanella sp. S4079, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI00037673B1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ19094.1}; TaxID=579483 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella sp. S407
hypothetical protein
cg2_3.0_scaffold_9298_c_2
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(934..2001)
DNA (1068bp) protein (356aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VBI6_9RHOB rbh
cg2_3.0_scaffold_9298_c_3
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2116..2478)
DNA (363bp) protein (121aa)
50S ribosomal protein L20 n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IKV9_9RHOB rbh
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Act
rplT; 50S ribosomal protein L20
cg2_3.0_scaffold_9298_c_4
Loktanella hongkongensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2491..2691)
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=1 Tax=Loktanella hongkongensis RepID=UPI0003648154 rbh
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1122180 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Lok
rpmI; 50S ribosomal protein L35
cg2_3.0_scaffold_9298_c_5
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2929..3063
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCI8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ13854.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
cg2_3.0_scaffold_9298_c_6
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3142..3738
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCI7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ13853.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
lipoprotein
cg2_3.0_scaffold_9298_c_7
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3745..4389)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00035EEF72 rbh
Fructose transport system kinase {ECO:0000313|EMBL:KHQ51469.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoc
frcK; fructose transport system kinase
cg2_3.0_scaffold_9298_c_8
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4386..5555)
DNA (1170bp) protein (390aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; Tax
argE1; acetylornithine deacetylase ArgE (EC:3.5.1.16)
Acetylornithine deacetylase n=1 Tax=Roseovarius sp. 217 RepID=A3W2T6_9RHOB rbh
cg2_3.0_scaffold_9298_c_9
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5876..6643)
DNA (768bp) protein (256aa)
Membrane protein, putative n=4 Tax=Rhodobacter capsulatus RepID=D5AQ63_RHOCB rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO51280.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
hypothetical protein
cg2_3.0_scaffold_9298_c_10
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..6887)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus B6 RepID=V8HAK8_RHOCA
Uncharacterized protein {ECO:0000313|EMBL:KEO51280.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
hypothetical protein
cg2_3.0_scaffold_9298_c_11
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6884..7564)
DNA (681bp) protein (227aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HM55_RHOCA rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO51279.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
cg2_3.0_scaffold_9298_c_12
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7575..8717)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=4 Tax=Rhodobacter capsulatus RepID=D5AQ65_RHOCB rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO51278.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
hypothetical protein rbh
cg2_3.0_scaffold_9298_c_13
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8714..9046)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Rhodobacter capsulatus RepID=V8HBX9_RHOCA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE84653.1}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsul
cg2_3.0_scaffold_9298_c_14
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9043..9585)
DNA (543bp) protein (181aa)
Lipoprotein involved in nitrous oxide reduction n=1 Tax=Rhodobacter capsulatus B6 RepID=V8HBU0_RHOCA rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO61534.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
NosL family protein
cg2_3.0_scaffold_9298_c_15
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9657..10277)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HK19_RHOCA rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO51275.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
hypothetical protein
cg2_3.0_scaffold_9298_c_16
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10431..10841)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JCF5_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO61536.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
hypothetical protein
cg2_3.0_scaffold_9298_c_17
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11023..12402
DNA (1380bp) protein (460aa)
beta-lactamase n=1 Tax=Dyella ginsengisoli RepID=UPI0003453B5E rbh
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:KFE36222.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioc
RNA-metabolising metallo-beta-lactamase
cg2_3.0_scaffold_9298_c_18
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12563..13645
DNA (1083bp) protein (361aa)
Secretion protein HlyD n=1 Tax=Nitratireductor indicus C115 RepID=K2NXM6_9RHIZ rbh
Secretion protein HlyD {ECO:0000313|EMBL:EKF39846.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
secretion protein HlyD
cg2_3.0_scaffold_9298_c_19
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13653..14864
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NK71_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB78203.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
cg2_3.0_scaffold_9298_c_20
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14861..15562
DNA (702bp) protein (234aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacte
ABC transporter (EC:3.6.3.25)
ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2NPR3_9RHIZ rbh
cg2_3.0_scaffold_9298_c_21
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15578..17116)
DNA (1539bp) protein (513aa)
tripartite tricarboxylate transporter TctA n=1 Tax=Oceanicola sp. S124 RepID=UPI000255975F rbh
Tripartite tricarboxylate transporter TctA {ECO:0000313|EMBL:KEO50970.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="
hypothetical protein
cg2_3.0_scaffold_9298_c_22
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17131..17562)
DNA (432bp) protein (144aa)
membrane protein n=1 Tax=Oceanicola sp. S124 RepID=UPI000255975E rbh
Membrane protein {ECO:0000313|EMBL:KEO50971.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 101
hypothetical protein
cg2_3.0_scaffold_9298_c_23
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17643..18632)
DNA (990bp) protein (330aa)
TctC protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VEN8_9RHOB rbh
TctC protein {ECO:0000313|EMBL:EAQ13376.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilu
hypothetical protein
cg2_3.0_scaffold_9298_c_24
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18750..19421
DNA (672bp) protein (224aa)
chemotaxis protein CheY n=1 Tax=Oceanicola sp. S124 RepID=UPI000255975C rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO50973.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
transcriptional regulatory protein
cg2_3.0_scaffold_9298_c_25
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19414..20544
DNA (1131bp) protein (377aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
histidine kinase n=1 Tax=Oceanicola sp. S124 RepID=UPI000255975B rbh
two-component system sensor histidine kinase protein
Displaying 25 items

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