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cg2_3.0_scaffold_12889_c

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_12889_c_1
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..222
DNA (222bp) protein (74aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
cmk; cytidylate kinase Cmk (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TVC0_9RHOB rbh
cg2_3.0_scaffold_12889_c_2
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(427..930)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EZK0_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA14884.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
hypothetical protein
cg2_3.0_scaffold_12889_c_3
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(931..2133)
DNA (1203bp) protein (401aa)
Aspartate aminotransferase {ECO:0000313|EMBL:EAQ10602.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EAQ10602.1};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
Aspartate aminotransferase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VME4_9RHOB rbh
aspartate aminotransferase
cg2_3.0_scaffold_12889_c_4
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2218..2616
DNA (399bp) protein (133aa)
DNA-binding protein, putative n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VME3_9RHOB rbh
DNA-binding protein, putative {ECO:0000313|EMBL:EAQ10601.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimib
transcriptional regulator
cg2_3.0_scaffold_12889_c_5
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2616..2876
DNA (261bp) protein (87aa)
TPR repeat family protein n=1 Tax=Roseovarius sp. 217 RepID=A3W866_9RHOB rbh
TPR repeat family protein {ECO:0000313|EMBL:EAQ23286.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp.
hypothetical protein
cg2_3.0_scaffold_12889_c_6
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2987..3484
DNA (498bp) protein (166aa)
Transcriptional regulator, MarR family n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28NZ4_JANSC rbh
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KGM87232.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Ro
MarR family transcriptional regulator
cg2_3.0_scaffold_12889_c_7
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3526..4227)
DNA (702bp) protein (234aa)
Lipoprotein, putative n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CF85_9RHOB rbh
Lipoprotein, putative {ECO:0000313|EMBL:EAR51410.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus
lipoprotein, putative
cg2_3.0_scaffold_12889_c_8
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4358..5266
DNA (909bp) protein (303aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FVY0_9RHOB rbh
cg2_3.0_scaffold_12889_c_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5281..6318
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWH0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79981.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
restriction endonuclease or methylase
Displaying 9 items

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