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cg2_3.0_scaffold_1305_c

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1305_c_1
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(289..975)
DNA (687bp) protein (229aa)
DNA-binding response regulator n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VML5_9RHOB rbh
DNA-binding response regulator {ECO:0000313|EMBL:EAQ10517.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimi
two component transcriptional regulator
cg2_3.0_scaffold_1305_c_2
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1131..2219
DNA (1089bp) protein (363aa)
GTP cyclohydrolase II {ECO:0000256|SAAS:SAAS00129532}; EC=3.5.4.25 {ECO:0000256|SAAS:SAAS00129532};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
GTP cyclohydrolase II (EC:3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VML4_9RHOB rbh
cg2_3.0_scaffold_1305_c_3
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2237..2731
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VML3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ10515.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
cg2_3.0_scaffold_1305_c_4
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2738..3343)
DNA (606bp) protein (202aa)
putative glutathione S-transferase family protein (EC:2.5.1.18)
Glutathione S-transferase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VGU3_9RHOB rbh
Glutathione S-transferase {ECO:0000313|EMBL:EAQ12498.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacte
cg2_3.0_scaffold_1305_c_5
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..3624)
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Rhodobacter RepID=A3PFR9_RHOS1 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ71375.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidoph
hypothetical protein
cg2_3.0_scaffold_1305_c_6
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3727..4977)
DNA (1251bp) protein (417aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Roseovarius sp. TM1035 RepID=A6E6D1_9RHOB rbh
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EDM29773.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovariu
MiaB family protein, possibly involved in tRNA or rRNA modification
cg2_3.0_scaffold_1305_c_7
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4977..5819)
DNA (843bp) protein (281aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Celeribacter baekdonensis B30 RepID=K2KAN5_9RHOB rbh
cg2_3.0_scaffold_1305_c_trna_1
unknown

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5966..6038
DNA (73bp)
transferRNA
cg2_3.0_scaffold_1305_c_trna_2
unknown

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6143..6215
DNA (73bp)
transferRNA
cg2_3.0_scaffold_1305_c_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6366..7361)
DNA (996bp) protein (332aa)
aldose 1-epimerase Tax=GWF1_Rhodobacteraceae_65_7_curated
aldose 1-epimerase
cg2_3.0_scaffold_1305_c_9
Yokenella regensburgei, Yokenella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7401..8513)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z7M8_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:EHM46300.1}; TaxID=1002368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yokenella.;" source="Yokenella regen
1,4-beta-xylanase
cg2_3.0_scaffold_1305_c_10
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8590..9873)
DNA (1284bp) protein (428aa)
Putative ABC-type sugar transport system, periplasmic component n=6 Tax=Vibrio nigripulchritudo RepID=U4KHN9_9VIBR rbh
putative ABC-type sugar transport system, periplasmic component
Putative ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CCO61419.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;"
cg2_3.0_scaffold_1305_c_11
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9917..10753)
DNA (837bp) protein (279aa)
Putative ABC-type sugar transport system, permease component n=6 Tax=Vibrio nigripulchritudo RepID=U4KIX1_9VIBR rbh
putative ABC-type sugar transport system, permease component
Permease {ECO:0000313|EMBL:KJY78831.1}; Putative ABC-type sugar transport system, permease component {ECO:0000313|EMBL:CCO61420.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria;
cg2_3.0_scaffold_1305_c_12
Psychromonas ingrahamii, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10753..11850)
DNA (1098bp) protein (366aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SXL5_PSYIN rbh
sugar ABC transporter inner membrane binding protein
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ABM04230.1}; TaxID=357804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psy
cg2_3.0_scaffold_1305_c_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11933..13039
DNA (1107bp) protein (369aa)
UPI0003CEF193 related cluster n=1 Tax=unknown RepID=UPI0003CEF193
LacI family transcriptional regulator {ECO:0000313|EMBL:KKB07108.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geo
LacI family transcriptional regulator
cg2_3.0_scaffold_1305_c_14
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13011..14177)
DNA (1167bp) protein (389aa)
Nucleotide sugar dehydrogenase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EDW8_9RHOB rbh
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EBA13090.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter
hypothetical protein
cg2_3.0_scaffold_1305_c_15
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14312..16198)
DNA (1887bp) protein (629aa)
Sucrose phosphorylase n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2YIP2_9RHOB rbh
Sucrose phosphorylase {ECO:0000313|EMBL:GAD54636.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabari
alpha amylase
cg2_3.0_scaffold_1305_c_16
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16285..17142)
DNA (858bp) protein (286aa)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LIC8_DINSH rbh
SMP-30/gluconolaconase/LRE domain-containing protein
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:ABV92982.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" sour
cg2_3.0_scaffold_1305_c_17
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17139..18038)
DNA (900bp) protein (300aa)
2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:EPX80985.1}; EC=2.7.1.58 {ECO:0000313|EMBL:EPX80985.1};; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
dgoK; 2-dehydro-3-deoxygalactonokinase (EC:2.7.1.58)
2-dehydro-3-deoxygalactonokinase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RSE3_9RHOB rbh
cg2_3.0_scaffold_1305_c_18
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18442..20826
DNA (2385bp) protein (795aa)
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587, ECO:0000313|EMBL:ABP70033.1};; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobac
Phosphorylase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WRL9_RHOS5 rbh
cg2_3.0_scaffold_1305_c_19
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20844..23042
DNA (2199bp) protein (733aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMA
glycogen branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Rhodobacter sp. SW2 RepID=C8S0I6_9RHOB rbh
cg2_3.0_scaffold_1305_c_20
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23092..24366
DNA (1275bp) protein (425aa)
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ENF4_9RHOB rbh
Tax=BJP_IG2158_Rhodobacterales_69_12
cg2_3.0_scaffold_1305_c_21
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24377..25243
DNA (867bp) protein (289aa)
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S0I8_9RHOB rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
Displaying 23 items

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