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cg2_3.0_scaffold_986_c

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_986_c_1
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1042
DNA (1041bp) protein (347aa)
Polysaccharide export protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VEI8_9RHOB rbh
Polysaccharide export protein {ECO:0000313|EMBL:EAQ13326.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimib
putative polysaccharide biosynthesis/export protein
cg2_3.0_scaffold_986_c_2
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1172..2593
DNA (1422bp) protein (474aa)
mannose-1-phosphate guanylyltransferase (GDP)/mannose-6-phosphate isomerase, type 2 (EC:2.7.7.13 2.7.7.22 5.3.1.8)
Plasmid pGal_F69, complete sequence {ECO:0000313|EMBL:AHD12089.1}; EC=2.7.7.13 {ECO:0000313|EMBL:AHD12089.1};; EC=2.7.7.22 {ECO:0000313|EMBL:AHD12089.1};; EC=5.3.1.8 {ECO:0000313|EMBL:AHD12089.1};; Ta
UPI0003D6CFA7 related cluster n=1 Tax=unknown RepID=UPI0003D6CFA7 rbh
cg2_3.0_scaffold_986_c_3
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2580..3953
DNA (1374bp) protein (458aa)
Phosphomannomutase n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KMH1_RHOSK rbh
phosphomannomutase
Phosphomannomutase {ECO:0000313|EMBL:ACM02062.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides
cg2_3.0_scaffold_986_c_4
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3975..4484)
DNA (510bp) protein (170aa)
Transcription termination/antitermination protein nusG n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ15_9RHOB rbh
Transcription termination/antitermination protein nusG {ECO:0000256|RuleBase:RU000538}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalass
nusG2; transcription antitermination protein NusG
cg2_3.0_scaffold_986_c_5
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4732..5784
DNA (1053bp) protein (351aa)
Rb133 n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NVN3_9RHOB rbh
Rb133 {ECO:0000313|EMBL:EEE35954.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH11.;"
Protein of unknown function/Peptidase G2, IMC autoproteolytic cleavage domain protein
cg2_3.0_scaffold_986_c_6
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5899..6336
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ELM6_9RHOB rbh
cg2_3.0_scaffold_986_c_7
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6333..7151
DNA (819bp) protein (273aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VGG1_9RHOB rbh
cg2_3.0_scaffold_986_c_8
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7155..7880)
DNA (726bp) protein (242aa)
Oxidoreductase, short-chain dehydrogenase/reductase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VGG0_9RHOB rbh
short-chain dehydrogenase/reductase SDR rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
cg2_3.0_scaffold_986_c_9
Loktanella sp. S4079, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7873..9030)
DNA (1158bp) protein (386aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GJM1_RUEST rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:KJZ19011.1}; TaxID=579483 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" sourc
cyclopropane-fatty-acyl-phospholipid synthase rbh
cg2_3.0_scaffold_986_c_10
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9030..9788)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruegeria mobilis F1926 RepID=R0F4F3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KCV83040.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium a
hypothetical protein
cg2_3.0_scaffold_986_c_11
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9785..11077)
DNA (1293bp) protein (431aa)
Amine oxidoreductase-like protein n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7ES89_PHAG2 rbh
Amine oxidoreductase-like protein {ECO:0000313|EMBL:KCV83039.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actib
amine oxidoreductase-like protein rbh
cg2_3.0_scaffold_986_c_12
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11171..11824
DNA (654bp) protein (218aa)
RNA polymerase sigma factor n=1 Tax=Ruegeria mobilis F1926 RepID=R0DVZ9_9RHOB rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1265309 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobil
RNA polymerase sigma factor RpoE
cg2_3.0_scaffold_986_c_13
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11821..12462
DNA (642bp) protein (214aa)
Transcriptional activator, putative n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VGF6_9RHOB rbh
Transcriptional activator, putative {ECO:0000313|EMBL:EAQ12361.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Mar
anti-ECF sigma factor ChrR
cg2_3.0_scaffold_986_c_14
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12631..14082
DNA (1452bp) protein (484aa)
Xylulokinase {ECO:0000313|EMBL:EEW57896.1}; EC=2.7.1.17 {ECO:0000313|EMBL:EEW57896.1};; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria
Xylulokinase n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CYU5_9RHOB rbh
xylulokinase
cg2_3.0_scaffold_986_c_15
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14079..15389
DNA (1311bp) protein (437aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1547437 species="Bacteria; Proteo
Xylose isomerase n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CYU6_9RHOB rbh
xylose isomerase
cg2_3.0_scaffold_986_c_16
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15393..16844
DNA (1452bp) protein (484aa)
Methylamine utilization protein MauG, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LV44_RUEPO rbh
methylamine utilization protein MauG, putative
Methylamine utilization protein MauG, putative {ECO:0000313|EMBL:AAV94163.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source
cg2_3.0_scaffold_986_c_17
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16913..17917
DNA (1005bp) protein (335aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VGE7_9RHOB rbh
cg2_3.0_scaffold_986_c_18
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17944..19182
DNA (1239bp) protein (413aa)
Membrane protein, putative n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VGF0_9RHOB rbh
Membrane protein, putative {ECO:0000313|EMBL:EAQ12355.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibact
major facilitator transporter
cg2_3.0_scaffold_986_c_19
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19244..21883)
DNA (2640bp) protein (880aa)
TRAP C4-dicarboxylate transport system permease DctM subunit n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VGF3_9RHOB rbh
TRAP C4-dicarboxylate transport system permease DctM subunit {ECO:0000313|EMBL:EAQ12358.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Mari
C4 dicarboxylatetransporter permease
cg2_3.0_scaffold_986_c_20
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21895..22890)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VGF4_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ12359.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
permease
cg2_3.0_scaffold_986_c_21
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22998..24083)
DNA (1086bp) protein (362aa)
Bacterial extracellular solute-binding protein, family 7 n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VGF5_9RHOB rbh
Bacterial extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:EAQ12360.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimi
Twin-arginine translocation pathway signal
cg2_3.0_scaffold_986_c_22
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24285..25064)
DNA (780bp) protein (260aa)
RbsA_2 protein {ECO:0000313|EMBL:KIT16746.1}; EC=3.6.3.17 {ECO:0000313|EMBL:KIT16746.1};; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannas
D-xylose transport ATP-binding protein XylG n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RNH8_9RHOB rbh
xylG; xylose ABC transporter, ATP-binding protein
cg2_3.0_scaffold_986_c_23
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25061..26365)
DNA (1305bp) protein (435aa)
Xylose ABC transporter, permease protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SUF6_9RHOB rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KJS07872.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_
Inner-membrane translocator
cg2_3.0_scaffold_986_c_24
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26438..27457)
DNA (1020bp) protein (340aa)
D-xylose ABC transporter substrate-binding protein n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GMG8_RUEST rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJS07873.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source=
D-xylose ABC transporter, substrate-binding protein
cg2_3.0_scaffold_986_c_25
unknown

Not on your lists

comp(27671..28375)
DNA (705bp) protein (235aa)

This feature has no annotations

cg2_3.0_scaffold_986_c_26
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28591..28845
DNA (255bp) protein (85aa)
Xylose repressor, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LV42_RUEPO rbh
xylose repressor, putative
Xylose repressor, putative {ECO:0000313|EMBL:AAV94165.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi
cg2_3.0_scaffold_986_c_27
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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28838..30385
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI000255894E rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM48388.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22I
ASPIC/UnbV
cg2_3.0_scaffold_986_c_28
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30423..31250)
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD22_9RHOB rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EAQ14051.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Marit
hypothetical protein
cg2_3.0_scaffold_986_c_29
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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31381..32178
DNA (798bp) protein (266aa)
cysQ; 3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:ABV95307.1}; EC=3.1.3.7 {ECO:0000313|EMBL:ABV95307.1};; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhod
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQ67_DINSH rbh
cg2_3.0_scaffold_986_c_30
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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32180..32806
DNA (627bp) protein (209aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000313|EMBL:AJE44988.1}; EC=2.7.7.38 {ECO:0000313|EMBL:AJE44988.1};; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodoba
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJY9_9RHOB rbh
Displaying 30 items

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