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cg2_3.0_scaffold_8896_c

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_8896_c_1
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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3..602
DNA (600bp) protein (200aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=CG_Dehalo_02
deb:DehaBAV1_0742 hypothetical protein id=1242471 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
tRNA-splicing ligase RtcB
cg2_3.0_scaffold_8896_c_2
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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607..1239
DNA (633bp) protein (211aa)
SagB-type dehydrogenase domain protein n=1 Tax=Pyrolobus fumarii 1A RepID=G0EFE1_PYRF1 id=1242472 bin=RBG2 species=Pyrolobus fumarii genus=Pyrolobus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=RBG2 organism_group=Chloroflexi rbh
NADH oxidase (noxc) Tax=CG_Dehalo_02
NADH oxidase (noxc)
cg2_3.0_scaffold_8896_c_3
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(1285..2880)
DNA (1596bp) protein (532aa)
alpha-isopropylmalate/homocitrate synthase transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=CG_Dehalo_02
det:DET0825 putative alpha-isopropylmalate/homocitrate synthase family transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] id=1242715 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
alpha-isopropylmalate/homocitrate synthase transferase
cg2_3.0_scaffold_8896_c_4
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(2874..3962)
DNA (1089bp) protein (363aa)
leuB; 3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=CG_Dehalo_02
dev:DhcVS_730 leuB; 3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] id=1242714 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
leuB; 3-isopropylmalate dehydrogenase
cg2_3.0_scaffold_8896_c_5
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(4030..4542)
DNA (513bp) protein (171aa)
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=CG_Dehalo_02
3-isopropylmalate dehydratase small subunit n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K051_DEHLB rbh
3-isopropylmalate dehydratase small subunit
cg2_3.0_scaffold_8896_c_6
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(4554..5093)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037E28D9 rbh
nicotinamidase-like amidase Tax=CG_Dehalo_02
nicotinamidase-like amidase
cg2_3.0_scaffold_8896_c_7
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(5240..5725)
DNA (486bp) protein (162aa)
Putative methyltransferase, YaeB/AF_0241 family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BLY4_9EURY rbh
putative methyltransferase, YaeB/AF_0241 family Tax=CG_Dehalo_02
putative methyltransferase, YaeB/AF_0241 family
cg2_3.0_scaffold_8896_c_8
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(6062..6634)
DNA (573bp) protein (191aa)
peptidase S14 ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=CG_Dehalo_02
peptidase S14 ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=1242558 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
peptidase S14 ClpP
cg2_3.0_scaffold_8896_c_9
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(6739..7704)
DNA (966bp) protein (322aa)
m4C-methyltransferase; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=CG_Dehalo_02
M4C-methyltransferase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YC28_DICT6 rbh
m4C-methyltransferase
cg2_3.0_scaffold_8896_c_10
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(7706..8338)
DNA (633bp) protein (211aa)
Putative uncharacterized protein Ta0828 n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=Q9HJY3_THEAC rbh
hypothetical protein Tax=CG_Dehalo_02
hypothetical protein
cg2_3.0_scaffold_8896_c_11
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(8446..9384)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003679542 rbh
Putative Rossmann fold nucleotide-binding protein (DNA uptake) Tax=CG_Dehalo_02
Rossmann fold nucleotide-binding protein (DNA uptake)
cg2_3.0_scaffold_8896_c_12
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(9389..11974)
DNA (2586bp) protein (862aa)
recQ; Superfamily II DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=CG_Dehalo_02
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00036335AD rbh
recQ; Superfamily II DNA helicase
cg2_3.0_scaffold_8896_c_13
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(11974..13335)
DNA (1362bp) protein (454aa)
homoaconitate hydratase family protein (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=CG_Dehalo_02
homoaconitate hydratase family protein (EC:4.2.1.33)
cg2_3.0_scaffold_8896_c_14
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13336..13740)
DNA (405bp) protein (135aa)
MgtC/SapB family membrane protein; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=CG_Dehalo_02
membrane protein, MgtC / SapB family; K07507 putative Mg2+ transporter-C (MgtC) family protein id=1242708 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
putative Mg2+ transporter-C (MgtC) family protein
cg2_3.0_scaffold_8896_c_15
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13893..15440)
DNA (1548bp) protein (516aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=CG_Dehalo_02
deb:DehaBAV1_0749 2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] id=1242707 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
Displaying 15 items

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