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cg2_3.0_scaffold_3294_c

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3294_c_1
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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3..185
DNA (183bp) protein (61aa)
hypothetical protein Tax=CG_Dehalo_02
cg2_3.0_scaffold_3294_c_2
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(532..915)
DNA (384bp) protein (128aa)
Transposase n=3 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L0T7_9BACT
transposase family protein Tax=CG_Dehalo_02
transposase family protein
cg2_3.0_scaffold_3294_c_3
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(1031..1414)
DNA (384bp) protein (128aa)
Transposase n=3 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L0T7_9BACT
transposase family protein Tax=CG_Dehalo_02
transposase family protein
cg2_3.0_scaffold_3294_c_4
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

1582..1923
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein hypA n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N5U6_ANATU id=1241583 bin=RBG2 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hydrogenase nickel incorporation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=CG_Dehalo_02
hydrogenase nickel incorporation protein HypA
cg2_3.0_scaffold_3294_c_5
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

1920..2603
DNA (684bp) protein (228aa)
Ni2+ insertion GTPase; K04652 hydrogenase nickel incorporation protein HypB Tax=CG_Dehalo_02
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB id=1241582 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
Ni2+ insertion GTPase
cg2_3.0_scaffold_3294_c_6
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

2678..4978
DNA (2301bp) protein (767aa)
hypF; [NiFe] hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF Tax=CG_Dehalo_02
det:DET1432 hypF; [NiFe] hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF id=1241884 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
HAD family hydrolase
cg2_3.0_scaffold_3294_c_7
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

5242..5469
DNA (228bp) protein (76aa)
hydrogenase assembly chaperone HypC/HupF; K04653 hydrogenase expression/formation protein HypC Tax=CG_Dehalo_02
hydrogenase assembly chaperone HypC/HupF; K04653 hydrogenase expression/formation protein HypC id=1241876 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hydrogenase assembly chaperone HypC/HupF
cg2_3.0_scaffold_3294_c_8
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

5456..6538
DNA (1083bp) protein (361aa)
hypD; hydrogenase maturation factor; K04654 hydrogenase expression/formation protein HypD Tax=CG_Dehalo_02
dev:DhcVS_1216 hypD; hydrogenase maturation factor; K04654 hydrogenase expression/formation protein HypD id=1241877 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypD; hydrogenase expression/formation protein HypD
cg2_3.0_scaffold_3294_c_9
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

6560..7603
DNA (1044bp) protein (348aa)
hypE; hydrogenase maturation factor; K04655 hydrogenase expression/formation protein HypE Tax=CG_Dehalo_02
dev:DhcVS_1217 hypE; hydrogenase maturation factor; K04655 hydrogenase expression/formation protein HypE id=1241878 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hydrogenase rbh
cg2_3.0_scaffold_3294_c_10
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(7678..7878)
DNA (201bp) protein (67aa)
rrf2 family protein Tax=CG_Dehalo_02
rrf2 family protein
cg2_3.0_scaffold_3294_c_11
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(7973..8440)
DNA (468bp) protein (156aa)
hybD; hydrogenase maturation protease; K01417 [EC:3.4.24.-] id=1241612 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hydrogenase maturation protease Tax=CG_Dehalo_02
vhtD; coenzyme F420-nonreducing hydrogenase, subunit D (maturation factor)
cg2_3.0_scaffold_3294_c_12
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(8437..8973)
DNA (537bp) protein (179aa)
hydrogenase maturation protease HycI; K08315 hydrogenase 3 maturation protease [EC:3.4.23.51] Tax=CG_Dehalo_02
Hydrogenase maturation protease HycI n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D451_METSW rbh
hydrogenase maturation protease HycI
cg2_3.0_scaffold_3294_c_13
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(8984..9241)
DNA (258bp) protein (86aa)
Tax=CG_Dehalo_02
cg2_3.0_scaffold_3294_c_14
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(9217..9603)
DNA (387bp) protein (129aa)
NADH-ubiquinone oxidoreductase, chain D (EC:1.6.5.3) Tax=CG_Dehalo_02
NADH dehydrogenase (ubiquinone); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] id=7200993 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
NADH-ubiquinone oxidoreductase, chain D (EC:1.6.5.3)
cg2_3.0_scaffold_3294_c_15
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(9600..10091)
DNA (492bp) protein (164aa)
NiFe-hydrogenase III large subunit Tax=CG_Dehalo_02
NiFe-hydrogenase III large subunit
cg2_3.0_scaffold_3294_c_16
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(10341..10490)
DNA (150bp) protein (50aa)
NADH dehydrogenase (ubiquinone); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=CG_Dehalo_02
Ech hydrogenase subunit E n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AUU6_PELPD
NADH dehydrogenase (ubiquinone)
cg2_3.0_scaffold_3294_c_17
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(10493..10948)
DNA (456bp) protein (152aa)
energy-conserving NiFe-hydrogenase (ferredoxin) subunit beta Tax=CG_Dehalo_02
energy-conserving NiFe-hydrogenase (ferredoxin) subunit beta
cg2_3.0_scaffold_3294_c_18
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(10926..11333)
DNA (408bp) protein (136aa)
Ech hydrogenase subunit C n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ALK4_PELPD rbh
NADH-quinone oxidoreductase subunit B Tax=CG_Dehalo_02
NADH-quinone oxidoreductase subunit B
cg2_3.0_scaffold_3294_c_19
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(11642..13102)
DNA (1461bp) protein (487aa)
hydrogen dehydrogenase (EC:1.12.1.2) Tax=CG_Dehalo_02
hydrogen dehydrogenase (EC:1.12.1.2)
Nickel-dependent hydrogenase large subunit n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS11_9BACT rbh
cg2_3.0_scaffold_3294_c_20
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13116..14096)
DNA (981bp) protein (327aa)
NADH ubiquinone oxidoreductase 20 kDa subunit; K14128 F420-non-reducing hydrogenase subunit G [EC:1.12.99.-] Tax=CG_Dehalo_02
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS10_9BACT rbh
NADH ubiquinone oxidoreductase 20 kDa subunit
cg2_3.0_scaffold_3294_c_21
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(14089..14268)
DNA (180bp) protein (60aa)
methyl-viologen-reducing hydrogenase delta subunit; K14127 F420-non-reducing hydrogenase iron-sulfur subunit D [EC:1.12.99.-] Tax=CG_Dehalo_02
Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9W4_AMMDK rbh
methyl-viologen-reducing hydrogenase delta subunit
cg2_3.0_scaffold_3294_c_22
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

14501..15583
DNA (1083bp) protein (361aa)
Transposase n=3 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L0T7_9BACT rbh
transposase family protein Tax=CG_Dehalo_02
transposase family protein
cg2_3.0_scaffold_3294_c_23

Not on your lists

comp(15571..15687)
DNA (117bp) protein (39aa)
Marine sediment metagenome DNA, contig: S03H2_C00877 {ECO:0000313|EMBL:GAH26144.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 23 items

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