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cg2_3.0_scaffold_3342_c

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3342_c_1

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comp(3..275)
DNA (273bp) protein (91aa)
Marine sediment metagenome DNA, contig: S06H3_S00562 {ECO:0000313|EMBL:GAI26711.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cg2_3.0_scaffold_3342_c_2
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(277..522)
DNA (246bp) protein (82aa)
Tax=CG_Dehalo_02
cg2_3.0_scaffold_3342_c_3
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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740..1444
DNA (705bp) protein (235aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=CG_Dehalo_02
det:DET0339 trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine-N1-)-methyltransferase [EC:2.1.1.31] id=1242236 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
cg2_3.0_scaffold_3342_c_4
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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1447..1803
DNA (357bp) protein (119aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=CG_Dehalo_02
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=1242235 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
50S ribosomal protein L19
cg2_3.0_scaffold_3342_c_5
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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1804..4212
DNA (2409bp) protein (803aa)
priA; primosomal protein N; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=CG_Dehalo_02
dev:DhcVS_278 primosomal protein N, (replication factor Y) (superfamily II helicase); K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.1.-] id=1242234 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
priA; primosomal protein N
cg2_3.0_scaffold_3342_c_6
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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4249..4734
DNA (486bp) protein (162aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=CG_Dehalo_02
def; peptide deformylase (EC:3.5.1.88); K01462 [EC:3.5.1.88] id=1242980 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
peptide deformylase
cg2_3.0_scaffold_3342_c_7
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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4928..6085
DNA (1158bp) protein (386aa)
Acyl-CoA dehydrogenase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4M9_DESTA rbh
acyl-CoA dehydrogenase Tax=CG_Dehalo_02
acyl-CoA dehydrogenase
cg2_3.0_scaffold_3342_c_8
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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6153..7778
DNA (1626bp) protein (542aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C376_DESTA rbh
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II Tax=CG_Dehalo_02
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
cg2_3.0_scaffold_3342_c_9
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(7768..8691)
DNA (924bp) protein (308aa)
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) Tax=CG_Dehalo_02
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16)
UniRef90_D5MHP1 Spermidine synthase n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MHP1_9BACT id=1241435 bin=RBG2 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_3342_c_10
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(8691..9068)
DNA (378bp) protein (126aa)
S-adenosylmethionine decarboxylase proenzyme (AdoMetDC)(SamDC) (EC:4.1.1.50); K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=CG_Dehalo_02
S-adenosylmethionine decarboxylase proenzyme (AdoMetDC)(SamDC) (EC:4.1.1.50); K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] id=1241434 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
S-adenosylmethionine decarboxylase (EC:4.1.1.50)
cg2_3.0_scaffold_3342_c_11
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(9188..10042)
DNA (855bp) protein (285aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=CG_Dehalo_02
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDN6_9CHLR id=1241517 bin=RBG2 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
HemK family modification methylase
cg2_3.0_scaffold_3342_c_12
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(10039..11109)
DNA (1071bp) protein (357aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=CG_Dehalo_02
dly:Dehly_0966 peptide chain release factor 1; K02835 peptide chain release factor RF-1 id=1241518 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
peptide chain release factor 1
cg2_3.0_scaffold_3342_c_13
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

11198..12037
DNA (840bp) protein (280aa)
hypothetical protein; K09116 hypothetical protein Tax=CG_Dehalo_02
protein of unknown function DUF89; K09116 hypothetical protein id=1241519 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hypothetical protein
cg2_3.0_scaffold_3342_c_14
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(12047..12604)
DNA (558bp) protein (186aa)
Appr-1-p processing domain protein n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CMT6_DESK7 id=1241760 bin=RBG2 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi rbh
Appr-1-p processing domain-containing protein Tax=CG_Dehalo_02
Appr-1-p processing domain-containing protein
cg2_3.0_scaffold_3342_c_15
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists


13051..13875
DNA (825bp) protein (275aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=CG_Dehalo_02
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BGQ4_DEHSV rbh
ksgA; dimethyladenosine transferase
cg2_3.0_scaffold_3342_c_16
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

13833..14744
DNA (912bp) protein (304aa)
ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, homoserine kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=CG_Dehalo_02
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QA18_9CHLR rbh
ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, homoserine kinase
cg2_3.0_scaffold_3342_c_17
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

14764..15327
DNA (564bp) protein (188aa)
SNARE associated Golgi protein-associated protein n=5 Tax=Dehalococcoides mccartyi RepID=D3SKX7_DEHSG rbh
hypothetical protein Tax=CG_Dehalo_02
hypothetical protein
cg2_3.0_scaffold_3342_c_18
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(15304..15696)
DNA (393bp) protein (131aa)
polynucleotide adenylyltransferase region; K00970 poly(A) polymerase [EC:2.7.7.19] id=1243589 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
polynucleotide adenylyltransferase Tax=CG_Dehalo_02
polynucleotide adenylyltransferase
Displaying 18 items

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