ggKbase home page

cg2_3.0_scaffold_4142_c

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_4142_c_1
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(1..678)
DNA (678bp) protein (226aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=CG_Dehalo_02
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PBK6_DEFDS
cg2_3.0_scaffold_4142_c_2
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

784..1803
DNA (1020bp) protein (340aa)
hcrA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor Tax=CG_Dehalo_02
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=1241599 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
heat-inducible transcription repressor
cg2_3.0_scaffold_4142_c_3
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

1818..2387
DNA (570bp) protein (190aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=CG_Dehalo_02
GrpE protein; K03687 molecular chaperone GrpE id=1241600 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
GrpE protein HSP-70 cofactor
cg2_3.0_scaffold_4142_c_4
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

2365..4245
DNA (1881bp) protein (627aa)
deb:DehaBAV1_1208 dnaK; molecular chaperone DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK id=1241601 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Dehalo_02
dnaK; molecular chaperone DnaK
cg2_3.0_scaffold_4142_c_5
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

4348..5946
DNA (1599bp) protein (533aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] Tax=CG_Dehalo_02
sat:SYN_02086 phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] id=1241602 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
cg2_3.0_scaffold_4142_c_6
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

5986..6342
DNA (357bp) protein (119aa)
TraR/DksA family transcriptional regulator Tax=CG_Dehalo_02
TraR/DksA family transcriptional regulator id=1241603 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
TraR/DksA family transcriptional regulator
cg2_3.0_scaffold_4142_c_7
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

6332..6838
DNA (507bp) protein (169aa)
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=CG_Dehalo_02
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Geobacter sp. M18 RepID=E8WUY3_GEOS8 id=1241604 bin=RBG2 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_4142_c_8
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

6816..7727
DNA (912bp) protein (304aa)
ribosomal large subunit pseudouridine synthase, RluD subfamily (EC:4.2.1.70) Tax=CG_Dehalo_02
deh:cbdb_A1328 cbdbA1328; ribosomal large subunit pseudouridine synthase D; K06180 ribosomal large subunit pseudouridine synthase D [EC:5.4.99.12] id=1241605 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
ribosomal large subunit pseudouridine synthase, RluD subfamily (EC:4.2.1.70)
cg2_3.0_scaffold_4142_c_9
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

7783..9015
DNA (1233bp) protein (411aa)
histidine--tRNA ligase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Dehalo_02
det:DET0846 histidyl-tRNA synthetase, putative; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=1242262 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
histidine--tRNA ligase (EC:6.1.1.21)
cg2_3.0_scaffold_4142_c_10
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

9022..10449
DNA (1428bp) protein (476aa)
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17) Tax=CG_Dehalo_02
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
det:DET0845 ATP phosphoribosyltransferase, putaitve id=1242260 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
cg2_3.0_scaffold_4142_c_11
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

10446..11738
DNA (1293bp) protein (431aa)
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=CG_Dehalo_02
deb:DehaBAV1_0763 hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] id=1242259 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
histidinol dehydrogenase (EC:1.1.1.23)
cg2_3.0_scaffold_4142_c_12
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

11739..12863
DNA (1125bp) protein (375aa)
hisC; histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=CG_Dehalo_02
dev:DhcVS_747 hisC; histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=1242258 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hisC; histidinol-phosphate aminotransferase
cg2_3.0_scaffold_4142_c_13
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

12873..13463
DNA (591bp) protein (197aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=CG_Dehalo_02
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=1242257 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
cg2_3.0_scaffold_4142_c_14
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

13674..13868
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037B849B
rbp; RNA recognition motif-containing protein Tax=CG_Dehalo_02
RNA recognition motif-containing protein
Displaying 14 items

View Taxonomy