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cg2_3.0_scaffold_255_c

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_255_c_1
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..291)
DNA (291bp) protein (97aa)
alkaline phosphatase; K01077 alkaline phosphatase [EC:3.1.3.1] Tax=CG_Paludi_01
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003725A75
alkaline phosphatase
cg2_3.0_scaffold_255_c_2
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(298..615)
DNA (318bp) protein (106aa)
Transcriptional regulator n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F0_PALPW rbh
transcriptional regulator Tax=CG_Paludi_01
transcriptional regulator
cg2_3.0_scaffold_255_c_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(626..1894)
DNA (1269bp) protein (423aa)
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=CG_Paludi_01
Lytic transglycosylase catalytic n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F1_PALPW rbh
lytic transglycosylase
cg2_3.0_scaffold_255_c_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1942..2571)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F2_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_255_c_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2568..3458)
DNA (891bp) protein (297aa)
Chromosome segregation DNA-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F3_PALPW rbh
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family Tax=CG_Paludi_01
chromosome segregation DNA-binding protein rbh
cg2_3.0_scaffold_255_c_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3511..4278)
DNA (768bp) protein (256aa)
Chromosome segregation ATPase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4F4_PALPW rbh
chromosome segregation ATPase; K03496 chromosome partitioning protein Tax=CG_Paludi_01
chromosome segregation ATPase
cg2_3.0_scaffold_255_c_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4667..7432
DNA (2766bp) protein (922aa)
TonB-dependent receptor plug n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T156_PALPW rbh
tonb-dependent receptor plug Tax=CG_Paludi_01
tonb-dependent receptor plug
cg2_3.0_scaffold_255_c_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7521..7736)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T479_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_255_c_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7827..8564)
DNA (738bp) protein (246aa)
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=CG_Paludi_01
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T886_PALPW rbh
cg2_3.0_scaffold_255_c_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8585..9229)
DNA (645bp) protein (215aa)
SNARE associated Golgi protein-related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T887_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_255_c_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9351..10805)
DNA (1455bp) protein (485aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T888_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_255_c_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11371..14700
DNA (3330bp) protein (1110aa)
transcriptioN-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=CG_Paludi_01
Transcription-repair-coupling factor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2M4_PALPW rbh
transcription-repair coupling factor
cg2_3.0_scaffold_255_c_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14831..15772
DNA (942bp) protein (314aa)
malate dehydrogenase (nad) (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=CG_Paludi_01
malate dehydrogenase (nad) (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7P9_PALPW rbh
cg2_3.0_scaffold_255_c_14
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15963..16382
DNA (420bp) protein (140aa)
Ferric uptake regulator, Fur family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q1_PALPW rbh
ferric uptake regulator, fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator Tax=CG_Paludi_01
ferric uptake regulator, fur family
cg2_3.0_scaffold_255_c_15
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16492..17772
DNA (1281bp) protein (427aa)
Surface antigen (D15) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q2_PALPW rbh
surface antigen (d15) Tax=CG_Paludi_01
surface antigen (d15)
cg2_3.0_scaffold_255_c_16
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17800..18897
DNA (1098bp) protein (366aa)
Glycosyl transferase family 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q3_PALPW rbh
family 2 glycosyl transferase Tax=CG_Paludi_01
family 2 glycosyl transferase
cg2_3.0_scaffold_255_c_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18888..19346)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q4_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_255_c_18
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19325..20314)
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q5_PALPW rbh
aldo/keto reductase Tax=CG_Paludi_01
aldo/keto reductase
cg2_3.0_scaffold_255_c_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20327..20917)
DNA (591bp) protein (197aa)
LemA protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YCE9_BACSE rbh
lema family protein; K03744 LemA protein Tax=CG_Paludi_01
lema family protein
cg2_3.0_scaffold_255_c_20
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21018..22310)
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q7_PALPW rbh
hypothetical protein; K06872 uncharacterized protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_255_c_21
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22360..22806)
DNA (447bp) protein (149aa)
slyD; FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03772 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] Tax=CG_Paludi_01
slyD; FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
FKBP-type peptidylprolyl isomerase n=1 Tax=Pedobacter agri RepID=UPI00029A3056 rbh
cg2_3.0_scaffold_255_c_22
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22890..24269)
DNA (1380bp) protein (460aa)
hypothetical protein Tax=CG_Paludi_01
[Fe-S]-binding protein
cg2_3.0_scaffold_255_c_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24298..25188)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Q9_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_255_c_24
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25543..26556)
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8N4_PALPW rbh
transcriptional regulator, laci family Tax=CG_Paludi_01
transcriptional regulator, laci family
cg2_3.0_scaffold_255_c_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26645..26833)
DNA (189bp) protein (63aa)
Tax=CG_Paludi_01
cg2_3.0_scaffold_255_c_26
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26857..29916
DNA (3060bp) protein (1020aa)
TonB-dependent receptor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8N3_PALPW rbh
tonb-dependent receptor Tax=CG_Paludi_01
tonb-dependent receptor
cg2_3.0_scaffold_255_c_27
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29938..31596
DNA (1659bp) protein (553aa)
ragb/susd domain protein Tax=CG_Paludi_01
ragb/susd domain-containing protein
cg2_3.0_scaffold_255_c_28
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31825..33138
DNA (1314bp) protein (438aa)
Tax=CG_Paludi_01
cg2_3.0_scaffold_255_c_29
unknown

Not on your lists

33150..33356
DNA (207bp) protein (69aa)

This feature has no annotations

cg2_3.0_scaffold_255_c_30
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33499..36243
DNA (2745bp) protein (915aa)
Alpha amylase catalytic region n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8M9_PALPW rbh
alpha amylase Tax=CG_Paludi_01
alpha amylase rbh
Displaying items 1-30 of 47 in total

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