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cg2_3.0_scaffold_705_c

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_705_c_1
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17..1021)
DNA (1005bp) protein (335aa)
SusD family protein n=2 Tax=Bacteroides RepID=B3JNJ5_9BACE rbh
RagB/SusD domain protein Tax=CG_Paludi_01
RagB/SusD domain protein
cg2_3.0_scaffold_705_c_2
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1037..4405)
DNA (3369bp) protein (1123aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JNJ6_9BACE rbh
tonb-dependent receptor plug Tax=CG_Paludi_01
TonB-dependent receptor plug domain protein
cg2_3.0_scaffold_705_c_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4502..5545)
DNA (1044bp) protein (348aa)
Sigma factor regulatory protein, FecR/PupR family n=7 Tax=Bacteroides RepID=C3QIK0_9BACE rbh
Fe2+-dicitrate sensor, membrane component Tax=CG_Paludi_01
Fe2+-dicitrate sensor, membrane component
cg2_3.0_scaffold_705_c_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5616..6212)
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor n=8 Tax=Bacteroides RepID=C3Q6H8_9BACE rbh
RNA polymerase ECF-type sigma factor Tax=CG_Paludi_01
RNA polymerase sigma 70
cg2_3.0_scaffold_705_c_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6837..8489
DNA (1653bp) protein (551aa)
pyrophosphate-dependent phosphofructokinase (EC:2.7.1.90); K00895 pyrophosphate--fructose-6-phosphate 1-phosphotransferase [EC:2.7.1.90] Tax=CG_Paludi_01
pyrophosphate-dependent phosphofructokinase (EC:2.7.1.90)
Pyrophosphate-dependent phosphofructokinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0F6_PALPW rbh
cg2_3.0_scaffold_705_c_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8603..9238)
DNA (636bp) protein (212aa)
Nitroreductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3T8_PALPW rbh
nitroreductase Tax=CG_Paludi_01
nitroreductase
cg2_3.0_scaffold_705_c_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9418..11016
DNA (1599bp) protein (533aa)
propionyL-CoA carboxylase carboxyltransferase subunit (EC:6.4.1.3) Tax=CG_Paludi_01
propionyl-CoA carboxylase carboxyltransferase subunit (EC:6.4.1.3)
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U5_PALPW rbh
cg2_3.0_scaffold_705_c_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11031..12527
DNA (1497bp) protein (499aa)
carbamoyL-phosphate synthase l chain ATP-binding protein (EC:6.4.1.1); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=CG_Paludi_01
carbamoyl-phosphate synthase l ATP-binding protein (EC:6.4.1.1)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U6_PALPW rbh
cg2_3.0_scaffold_705_c_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12531..13076
DNA (546bp) protein (182aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U7_PALPW rbh
biotin/lipoyl attachment domaiN-containing protein Tax=CG_Paludi_01
biotin/lipoyl attachment domain-containing protein
cg2_3.0_scaffold_705_c_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13157..14245)
DNA (1089bp) protein (363aa)
2-nitropropane dioxygenase NPD n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2X3_PALPW rbh
2-nitropropane dioxygenase npd Tax=CG_Paludi_01
2-nitropropane dioxygenase npd
cg2_3.0_scaffold_705_c_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14363..15220)
DNA (858bp) protein (286aa)
enoyL-(acyL-carrier-protein) reductase (NADH) (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=CG_Paludi_01
enoyl-(acyl-carrier-protein) reductase (NADH) (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T584_PALPW rbh
cg2_3.0_scaffold_705_c_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15324..15980)
DNA (657bp) protein (219aa)
semialdehyde dehydrogenase nad - binding protein Tax=CG_Paludi_01
semialdehyde dehydrogenase nad - binding protein
cg2_3.0_scaffold_705_c_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15977..17347)
DNA (1371bp) protein (457aa)
Lytic transglycosylase catalytic n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Q3_PALPW rbh
lytic transglycosylase Tax=CG_Paludi_01
lytic transglycosylase
cg2_3.0_scaffold_705_c_14
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17355..18092)
DNA (738bp) protein (246aa)
3'-5' exonuclease, PolB n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Q2_PALPW rbh
3'-5' exonuclease, polb; K07501 hypothetical protein Tax=CG_Paludi_01
3'-5' exonuclease, polb
cg2_3.0_scaffold_705_c_15
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18101..18787)
DNA (687bp) protein (229aa)
uridine kinase (EC:2.7.1.48); K00876 uridine kinase [EC:2.7.1.48] Tax=CG_Paludi_01
uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Q1_PALPW rbh
cg2_3.0_scaffold_705_c_16
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18938..19252)
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5D6_PALPW rbh
thioredoxin; K03671 thioredoxin 1 Tax=CG_Paludi_01
thioredoxin
cg2_3.0_scaffold_705_c_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19396..23193)
DNA (3798bp) protein (1266aa)
DNA polymerase iii, alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=CG_Paludi_01
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5D5_PALPW rbh
cg2_3.0_scaffold_705_c_18
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23447..23824
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8F2_PALPW rbh
endoribonuclease L-psp; K07567 TdcF protein Tax=CG_Paludi_01
endoribonuclease L-psp
cg2_3.0_scaffold_705_c_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23910..24584
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8G6_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_705_c_20
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24593..26047
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8G4_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_705_c_21
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26111..28834
DNA (2724bp) protein (908aa)
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=CG_Paludi_01
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T072_PALPW rbh
cg2_3.0_scaffold_705_c_22
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28918..29691)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0003160E73 rbh
Transcriptional regulators Tax=CG_Paludi_01
Transcriptional regulators
cg2_3.0_scaffold_705_c_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29642..30631)
DNA (990bp) protein (330aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=CG_Paludi_01
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T169_PALPW rbh
cg2_3.0_scaffold_705_c_24
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(30727..30912)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=3 Tax=Porphyromonadaceae RepID=G9S7I2_9PORP rbh
LSU ribosomal protein l32p; K02911 large subunit ribosomal protein L32 Tax=CG_Paludi_01
50S ribosomal protein L32
cg2_3.0_scaffold_705_c_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30934..31500)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T171_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_705_c_26
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31650..32813)
DNA (1164bp) protein (388aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T172_PALPW rbh
integral membrane sensor signal transduction histidine kinase Tax=CG_Paludi_01
integral membrane sensor signal transduction histidine kinase
Displaying 26 items

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