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cg2_3.0_scaffold_388_c

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_388_c_1
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(117..2351)
DNA (2235bp) protein (745aa)
SSU ribosomal protein S1P n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T141_PALPW rbh
SSU ribosomal protein s1p; K02945 small subunit ribosomal protein S1 Tax=CG_Paludi_01
30S ribosomal protein s1
cg2_3.0_scaffold_388_c_2
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2443..4491)
DNA (2049bp) protein (683aa)
DNA ligase, nad-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=CG_Paludi_01
DNA ligase, nad-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3B7_PALPW rbh
cg2_3.0_scaffold_388_c_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4855..4986)
DNA (132bp) protein (44aa)
Tax=CG_Paludi_01
cg2_3.0_scaffold_388_c_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5075..5362)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4D8_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_388_c_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6039..7265)
DNA (1227bp) protein (409aa)
peptidase t (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4] Tax=CG_Paludi_01
peptidase t (EC:3.4.11.4)
Peptidase T n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T227_PALPW rbh
cg2_3.0_scaffold_388_c_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7311..8480)
DNA (1170bp) protein (390aa)
iroN-containing alcohol dehydrogenase; K00100 [EC:1.1.1.-] Tax=CG_Paludi_01
Iron-containing alcohol dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T877_PALPW rbh
iron-containing alcohol dehydrogenase
cg2_3.0_scaffold_388_c_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9038..9364
DNA (327bp) protein (109aa)
Regulatory protein ArsR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5F0_PALPW rbh
regulatory protein arsr Tax=CG_Paludi_01
regulatory protein arsr
cg2_3.0_scaffold_388_c_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9377..9766
DNA (390bp) protein (130aa)
Rhodanese domain protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SH18_PELPB
rhodanese domain-containing protein Tax=CG_Paludi_01
rhodanese domain-containing protein
cg2_3.0_scaffold_388_c_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9806..10231
DNA (426bp) protein (142aa)
proteiN-tyrosine phosphatase, low molecular weight (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1] Tax=CG_Paludi_01
protein-tyrosine phosphatase, low molecular weight (EC:1.20.4.1)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5F1_PALPW rbh
cg2_3.0_scaffold_388_c_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10251..11312
DNA (1062bp) protein (354aa)
Arsenical-resistance protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5F4_PALPW rbh
arsenicaL-resistance protein; K03325 arsenite transporter, ACR3 family Tax=CG_Paludi_01
arsenical-resistance protein rbh
cg2_3.0_scaffold_388_c_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11458..11751)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2E8V6_9BACT rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_388_c_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11908..12309)
DNA (402bp) protein (134aa)
undecaprenol kinase (EC:2.7.1.66); K00901 diacylglycerol kinase [EC:2.7.1.107] Tax=CG_Paludi_01
undecaprenol kinase (EC:2.7.1.66)
Undecaprenol kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5P4_PALPW rbh
cg2_3.0_scaffold_388_c_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12406..13218
DNA (813bp) protein (271aa)
Esterase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6A3_PALPW rbh
esterase Tax=CG_Paludi_01
esterase
cg2_3.0_scaffold_388_c_14
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13239..13913
DNA (675bp) protein (225aa)
Alanine racemase domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T257_PALPW rbh
alanine racemase; K06997 Tax=CG_Paludi_01
alanine racemase
cg2_3.0_scaffold_388_c_15
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13923..15017
DNA (1095bp) protein (365aa)
DNA replication and repair protein RecF n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T223_PALPW rbh
DNA replication and repair protein recf; K03629 DNA replication and repair protein RecF Tax=CG_Paludi_01
DNA replication and repair protein recf
cg2_3.0_scaffold_388_c_16
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15014..15619)
DNA (606bp) protein (202aa)
dephosphO-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=CG_Paludi_01
dephosphoCoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q9_PALPW rbh
cg2_3.0_scaffold_388_c_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15634..17364)
DNA (1731bp) protein (577aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q8_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_388_c_18
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17381..18916)
DNA (1536bp) protein (512aa)
Sugar transferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3H4_PALPW rbh
sugar transferase Tax=CG_Paludi_01
sugar transferase
cg2_3.0_scaffold_388_c_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18941..21640)
DNA (2700bp) protein (900aa)
Outer membrane assembly protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Z4_PALPW rbh
outer membrane assembly protein Tax=CG_Paludi_01
outer membrane assembly protein rbh
cg2_3.0_scaffold_388_c_20
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21802..22515
DNA (714bp) protein (238aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T831_PALPW rbh
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Paludi_01
ECF subfamily RNA polymerase sigma-70 factor
cg2_3.0_scaffold_388_c_21
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22598..22783
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T832_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_388_c_22
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22906..24828)
DNA (1923bp) protein (641aa)
DNA topoisomerase iii (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2] Tax=CG_Paludi_01
DNA topoisomerase iii (EC:5.99.1.2)
DNA topoisomerase III n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3X9_PALPW rbh
cg2_3.0_scaffold_388_c_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24825..26171)
DNA (1347bp) protein (449aa)
tRNA(ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=CG_Paludi_01
tRNA(Ile)-lysidine synthase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZV3_9PORP rbh
tRNA(ile)-lysidine synthetase
cg2_3.0_scaffold_388_c_24
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26365..27627
DNA (1263bp) protein (421aa)
L-rhamnose isomerase (EC:5.3.1.14); K01813 L-rhamnose isomerase [EC:5.3.1.14] Tax=CG_Paludi_01
rhaA; L-rhamnose isomerase (EC:5.3.1.14)
rhamnose isomerase n=1 Tax=Alistipes senegalensis RepID=UPI000310E797 rbh
cg2_3.0_scaffold_388_c_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27646..28719
DNA (1074bp) protein (358aa)
L-rhamnose-proton symport protein (RhaT) n=1 Tax=Flavobacterium sp. CF136 RepID=J3BXP7_9FLAO rbh
rhamnose-proton symporter; K02856 L-rhamnose-H+ transport protein Tax=CG_Paludi_01
sugar:proton symporter
cg2_3.0_scaffold_388_c_26
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28805..29692
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000303088B rbh
AraC family transcriptional regulator Tax=CG_Paludi_01
AraC family transcriptional regulator
cg2_3.0_scaffold_388_c_27
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29818..33357)
DNA (3540bp) protein (1180aa)
pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-] Tax=CG_Paludi_01
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1D7_PALPW rbh
pyruvate ferredoxin/flavodoxin oxidoreductase rbh
cg2_3.0_scaffold_388_c_28
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33434..34609)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1D8_PALPW rbh
hypothetical protein; K07133 Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_388_c_29
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34838..36226
DNA (1389bp) protein (463aa)
L-fucose transporter; K02429 MFS transporter, FHS family, L-fucose permease Tax=CG_Paludi_01
L-fucose transporter
cg2_3.0_scaffold_388_c_30
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36236..37219
DNA (984bp) protein (328aa)
FucR protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IL29_9PORP rbh
FucR Tax=CG_Paludi_01
FucR
Displaying items 1-30 of 33 in total

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