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cg2_3.0_scaffold_1960_c

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1960_c_1
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..583
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI000368B686 rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_1960_c_2
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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974..4615
DNA (3642bp) protein (1214aa)
chitinase (EC:3.2.1.14); K01183 chitinase [EC:3.2.1.14] Tax=CG_Paludi_01
Putative chitinase n=1 Tax=Vibrio proteolyticus NBRC 13287 RepID=U3A3J1_VIBPR rbh
chitinase
cg2_3.0_scaffold_1960_c_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4881..6734
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCR6_9FIRM rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_1960_c_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6857..8467
DNA (1611bp) protein (537aa)
carbohydrate-binding protein SusD n=1 Tax=Rudanella lutea RepID=UPI0003811AF1 rbh
RagB/SusD domain-containing protein Tax=CG_Paludi_01
RagB/SusD domain-containing protein
cg2_3.0_scaffold_1960_c_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8535..11843
DNA (3309bp) protein (1103aa)
TonB-dependent receptor plug n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EL02_RUNSL
TonB-dependent receptor plug Tax=CG_Paludi_01
TonB-dependent receptor plug
cg2_3.0_scaffold_1960_c_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11950..12540
DNA (591bp) protein (197aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroides caccae RepID=A5ZI90_9BACE rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_1960_c_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12605..13498
DNA (894bp) protein (298aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DYW8_9BACE
Fe2+-dicitrate sensor, membrane component Tax=CG_Paludi_01
Fe2+-dicitrate sensor, membrane component
cg2_3.0_scaffold_1960_c_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13653..16634
DNA (2982bp) protein (994aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000364B172 rbh
unsaturated glucuronylhydrolase Tax=CG_Paludi_01
glucuronyl hydrolase
cg2_3.0_scaffold_1960_c_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16899..19052
DNA (2154bp) protein (718aa)
Hypothetical periplasmic protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L938_ZOBGA rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
cg2_3.0_scaffold_1960_c_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19111..20361
DNA (1251bp) protein (417aa)
mannitol-1-phosphate 5-dehydrogenase (EC:1.1.1.17); K00009 mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] Tax=CG_Paludi_01
mannitol-1-phosphate 5-dehydrogenase (EC:1.1.1.17)
cg2_3.0_scaffold_1960_c_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20527..20685
DNA (159bp) protein (53aa)
hypothetical protein; K09988 hypothetical protein Tax=CG_Paludi_01
hypothetical protein
Displaying 11 items

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