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cg2_3.0_scaffold_168_c

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_168_c_1
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..236)
DNA (234bp) protein (78aa)
transposase
Transposase {ECO:0000313|EMBL:AJF05951.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterran
cg2_3.0_scaffold_168_c_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1225..1479
DNA (255bp) protein (85aa)
Blr6338 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GK7_BRADU rbh
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg2_3.0_scaffold_168_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1473..3479
DNA (2007bp) protein (669aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037C32BE rbh
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit Tax=CG_Thiomicrospira_01
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
cg2_3.0_scaffold_168_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3476..4429
DNA (954bp) protein (318aa)
formate hydrogenlyase n=1 Tax=Lamprocystis purpurea RepID=UPI0003675440 rbh
formate hydrogenlyase subunit 4 Tax=CG_Thiomicrospira_01
formate hydrogenlyase subunit 4
cg2_3.0_scaffold_168_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4426..5112
DNA (687bp) protein (229aa)
formate hydrogenlyase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037720E3 rbh
hydrogenase 4 membrane component (E) Tax=CG_Thiomicrospira_01
hydrogenase 4 membrane component (E)
cg2_3.0_scaffold_168_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5109..6581
DNA (1473bp) protein (491aa)
oxidoreductase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003718BB0 rbh
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit Tax=CG_Thiomicrospira_01
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
cg2_3.0_scaffold_168_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6578..8173
DNA (1596bp) protein (532aa)
Ni,Fe-hydrogenase III large subunit n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YCU6_THIV6 rbh
Ni,Fe-hydrogenase III large subunit Tax=CG_Thiomicrospira_01
Ni,Fe-hydrogenase III large subunit
cg2_3.0_scaffold_168_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8183..8689
DNA (507bp) protein (169aa)
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UH97_9GAMM rbh
Ni,Fe-hydrogenase III small subunit Tax=CG_Thiomicrospira_01
Ni,Fe-hydrogenase III small subunit
cg2_3.0_scaffold_168_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8880..9332
DNA (453bp) protein (151aa)
Tax=CG_Thiomicrospira_01
cg2_3.0_scaffold_168_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10148..11017
DNA (870bp) protein (290aa)
Urease accessory protein UreD n=1 Tax=Klebsiella oxytoca E718 RepID=I6X532_KLEOX rbh
urease accessory protein UreD Tax=CG_Thiomicrospira_01
urease accessory protein UreD
cg2_3.0_scaffold_168_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11032..11334
DNA (303bp) protein (101aa)
Urease subunit gamma n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YAM0_THIV6 rbh
urease subunit gamma Tax=CG_Thiomicrospira_01
urease subunit gamma
cg2_3.0_scaffold_168_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11346..11675
DNA (330bp) protein (110aa)
urease subunit beta; K01429 urease subunit beta [EC:3.5.1.5] Tax=CG_Thiomicrospira_01
Urease subunit beta n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JE32_DESDE rbh
urease subunit beta
cg2_3.0_scaffold_168_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11659..13365
DNA (1707bp) protein (569aa)
ureC; urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5] Tax=CG_Thiomicrospira_01
ureC; urease alpha subunit (EC:3.5.1.5)
Urease subunit alpha n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K6E1_PSEPS rbh
cg2_3.0_scaffold_168_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13379..13822
DNA (444bp) protein (148aa)
Urease accessory protein UreE n=1 Tax=Grimontia sp. AK16 RepID=R1GZ37_9GAMM rbh
ureE; urease accessory protein UreE; K03187 urease accessory protein Tax=CG_Thiomicrospira_01
ureE; urease accessory protein UreE
cg2_3.0_scaffold_168_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..14485
DNA (663bp) protein (221aa)
Urease accessory protein UreF n=1 Tax=Beggiatoa alba B18LD RepID=I3CG73_9GAMM rbh
urease accessory protein ureF; K03188 urease accessory protein Tax=CG_Thiomicrospira_01
urease accessory protein ureF
cg2_3.0_scaffold_168_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14530..15132
DNA (603bp) protein (201aa)
urease accessory protein UreG n=1 Tax=Hahella ganghwensis RepID=UPI000371E130 rbh
ureG; urease accessory protein UreG; K03189 urease accessory protein Tax=CG_Thiomicrospira_01
ureG; urease accessory protein UreG
cg2_3.0_scaffold_168_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15133..15780
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QAU1_SULNB rbh
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg2_3.0_scaffold_168_c_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16119..17162
DNA (1044bp) protein (348aa)
amiE; acylamide amidohydrolase; K01426 amidase [EC:3.5.1.4] Tax=CG_Thiomicrospira_01
Aliphatic amidase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=AMIE_THISH rbh
amiE; acylamide amidohydrolase
cg2_3.0_scaffold_168_c_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17187..18932
DNA (1746bp) protein (582aa)
von Willebrand factor type A n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L145_HALNC rbh
von Willebrand factor A Tax=CG_Thiomicrospira_01
von Willebrand factor A
cg2_3.0_scaffold_168_c_20
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19041..19397)
DNA (357bp) protein (119aa)
Regulatory protein n=1 Tax=Agarivorans albus MKT 106 RepID=R9PJX8_AGAAL rbh
formamidase regulatory protein FmdB Tax=CG_Thiomicrospira_01
formamidase regulatory protein FmdB
cg2_3.0_scaffold_168_c_21
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19408..20640)
DNA (1233bp) protein (411aa)
fomramidase (EC:3.5.1.49); K01455 formamidase [EC:3.5.1.49] Tax=CG_Thiomicrospira_01
fomramidase (EC:3.5.1.49)
Formamidase n=1 Tax=Agarivorans albus MKT 106 RepID=R9PJK2_AGAAL rbh
cg2_3.0_scaffold_168_c_22
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20679..21368)
DNA (690bp) protein (230aa)
Urea ABC transporter n=1 Tax=Agarivorans albus MKT 106 RepID=R9PJP1_AGAAL rbh
urea ABC transporter ATP-binding protein UrtE Tax=CG_Thiomicrospira_01
urea ABC transporter ATP-binding protein
cg2_3.0_scaffold_168_c_23
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21381..22127)
DNA (747bp) protein (249aa)
Urea ABC transporter ATP-binding protein UrtD n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DV19_9GAMM rbh
urea ABC transporter ATP-binding protein UrtD Tax=CG_Thiomicrospira_01
urea ABC transporter ATP-binding protein UrtD
cg2_3.0_scaffold_168_c_24
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22162..23277)
DNA (1116bp) protein (372aa)
urea ABC transporter permease n=1 Tax=Gilvimarinus chinensis RepID=UPI000371D1D8 rbh
fmdF; ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=CG_Thiomicrospira_01
fmdF; ABC transporter permease
cg2_3.0_scaffold_168_c_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23291..24217)
DNA (927bp) protein (309aa)
Permease protein UrtB n=1 Tax=Agarivorans albus MKT 106 RepID=R9PJY4_AGAAL rbh
branched-chain amino acid ABC transporter permease Tax=CG_Thiomicrospira_01
urea ABC transporter permease
cg2_3.0_scaffold_168_c_26
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24524..25771)
DNA (1248bp) protein (416aa)
ABC transporter, periplasmic substrate-binding protein n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=Q0VN15_ALCBS rbh
ABC transporter periplasmic substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=CG_Thiomicrospira_01
ABC transporter periplasmic substrate-binding protein
cg2_3.0_scaffold_168_c_27
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26268..27656
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DY4_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg2_3.0_scaffold_168_c_28
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27653..30490)
DNA (2838bp) protein (946aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI0003705016 rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=CG_Thiomicrospira_01
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
cg2_3.0_scaffold_168_c_29
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30540..31742)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036FDB07 rbh
secretion protein HlyD; K02005 HlyD family secretion protein Tax=CG_Thiomicrospira_01
secretion protein HlyD
cg2_3.0_scaffold_168_c_30
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31745..34108)
DNA (2364bp) protein (788aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035C794A rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Thiomicrospira_01
permease
Displaying items 1-30 of 54 in total

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