ggKbase home page

cg2_3.0_scaffold_3594_c

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3594_c_1
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193..1101)
DNA (909bp) protein (303aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=CG_Thiomicrospira_01
Lipid A biosynthesis acyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J94_THICR rbh
lipid A biosynthesis acyltransferase
cg2_3.0_scaffold_3594_c_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1104..1343)
DNA (240bp) protein (80aa)
transcriptional modulator of MazE/toxin, MazF; K07171 mRNA interferase [EC:3.1.-.-] Tax=CG_Thiomicrospira_01
MazF family transcriptional regulator n=1 Tax=Aquaspirillum serpens RepID=UPI0003B39FBB rbh
Programmed cell death toxin MazF
cg2_3.0_scaffold_3594_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1340..1609)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Fangia hongkongensis RepID=UPI00036197D3 rbh
mazE; cell growth regulatory protein MazE; K07172 antitoxin Tax=CG_Thiomicrospira_01
mazE; Programmed cell death antitoxin MazE
cg2_3.0_scaffold_3594_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1675..2481)
DNA (807bp) protein (269aa)
PP-loop family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J95_THICR rbh
PP-loop protein Tax=CG_Thiomicrospira_01
PP-loop protein
cg2_3.0_scaffold_3594_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2568..3203)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J96_THICR rbh
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg2_3.0_scaffold_3594_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3315..4226
DNA (912bp) protein (304aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4TY34_SULKY rbh
periplasmic binding protein/laci transcriptional regulator; K10439 ribose transport system substrate-binding protein Tax=CG_Thiomicrospira_01
periplasmic binding protein/laci transcriptional regulator
cg2_3.0_scaffold_3594_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4251..6728
DNA (2478bp) protein (826aa)
Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4TY33_SULKY rbh
diguanylate cyclase/phosphodiesterase with extracellular sensor Tax=CG_Thiomicrospira_01
diguanylate cyclase/phosphodiesterase with extracellular sensor
cg2_3.0_scaffold_3594_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6725..7495)
DNA (771bp) protein (257aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=CG_Thiomicrospira_01
Hemin import ATP-binding protein HmuV n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=HMUV_THICR rbh
ABC transporter
cg2_3.0_scaffold_3594_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7496..8560)
DNA (1065bp) protein (355aa)
ATP-binding cassette superfamily transporter, permease component n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J98_THICR rbh
transport system permease; K02015 iron complex transport system permease protein Tax=CG_Thiomicrospira_01
transport system permease
cg2_3.0_scaffold_3594_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8613..9128
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036DA658 rbh
hugZ; heme oxygenase; K07226 hypothetical protein Tax=CG_Thiomicrospira_01
pyridoxamine 5'-phosphate oxidase
cg2_3.0_scaffold_3594_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9144..9914)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JA3_THICR rbh
hypothetical protein; K07090 Tax=CG_Thiomicrospira_01
hypothetical protein
cg2_3.0_scaffold_3594_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9911..11035)
DNA (1125bp) protein (375aa)
tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35); K00557 tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] Tax=CG_Thiomicrospira_01
tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35)
tRNA/tmRNA (uracil-C(5))-methyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=TRMA_THICR rbh
cg2_3.0_scaffold_3594_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11322..12566
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000373F7F2 rbh
response regulator Tax=CG_Thiomicrospira_01
cbrR; bile resistance regulator
cg2_3.0_scaffold_3594_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12667..13857
DNA (1191bp) protein (397aa)
AAA ATPase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAJ9_THICA rbh
AAA ATPase; K07133 Tax=CG_Thiomicrospira_01
ATPase AAA rbh
cg2_3.0_scaffold_3594_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13871..14254)
DNA (384bp) protein (128aa)
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg2_3.0_scaffold_3594_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14412..16487)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Acinetobacter parvus NIPH 1103 RepID=N8Q184_9GAMM rbh
putative transcriptional regulator Tax=CG_Thiomicrospira_01
putative transcriptional regulator
cg2_3.0_scaffold_3594_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16447..19698)
DNA (3252bp) protein (1084aa)
Adenine specific DNA methyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAK0_THICA rbh
adenine specific DNA methyltransferase Tax=CG_Thiomicrospira_01
adenine-specific DNA methyltransferase
cg2_3.0_scaffold_3594_c_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20257..20529
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036652CF rbh
plasmid maintenance system killer protein; K07334 proteic killer suppression protein Tax=CG_Thiomicrospira_01
plasmid maintenance system killer protein
cg2_3.0_scaffold_3594_c_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20539..20832
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036D91A0 rbh
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg2_3.0_scaffold_3594_c_20
unknown

Not on your lists

21088..21198
DNA (111bp) protein (37aa)

This feature has no annotations

cg2_3.0_scaffold_3594_c_21
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21240..21416
DNA (177bp) protein (59aa)
Tax=CG_Thiomicrospira_01
cg2_3.0_scaffold_3594_c_22
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21671..22000
DNA (330bp) protein (110aa)
AAA ATPase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DCX5_THICA rbh
ATPase AAA
AAA ATPase {ECO:0000313|EMBL:AEG31711.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cy
cg2_3.0_scaffold_3594_c_23
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22086..25805
DNA (3720bp) protein (1240aa)
metH; B12-dependent methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=CG_Thiomicrospira_01
metH; B12-dependent methionine synthase (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JA5_THICR rbh
cg2_3.0_scaffold_3594_c_24
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25878..26255
DNA (378bp) protein (126aa)
Polyketide synthase CurC n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZBQ6_SHEVD rbh
polyketide synthase CurC Tax=CG_Thiomicrospira_01
polyketide synthase CurC
cg2_3.0_scaffold_3594_c_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26258..27457
DNA (1200bp) protein (400aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) RepID=Q30P37_SULDN rbh
short chain dehydrogenase Tax=CG_Thiomicrospira_01
short chain dehydrogenase
cg2_3.0_scaffold_3594_c_26
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27490..29073
DNA (1584bp) protein (528aa)
autoinducer-2 (AI-2) kinase; K11216 autoinducer 2 (AI-2) kinase [EC:2.7.1.-] Tax=CG_Thiomicrospira_01
Carbohydrate kinase FGGY n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KE02_SHEWM rbh
autoinducer-2 (AI-2) kinase
cg2_3.0_scaffold_3594_c_27
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29095..29883
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DI4_THICR rbh
hypothetical protein; K07090 Tax=CG_Thiomicrospira_01
hypothetical protein
cg2_3.0_scaffold_3594_c_28
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30052..30435
DNA (384bp) protein (128aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=DNAA_THICR
chromosome replication initiator DnaA; K02313 chromosomal replication initiator protein Tax=CG_Thiomicrospira_01
chromosome replication initiator DnaA
Displaying 28 items

View Taxonomy