ggKbase home page

cg2_3.0_scaffold_4175_c

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_4175_c_trna_1
unknown

Not on your lists

comp(71..144)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_4175_c_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(144..620)
DNA (477bp) protein (159aa)
UPF0218 protein Hbor_05020 n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NM04_HALBP rbh
hypothetical protein; K09735 hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
cg2_3.0_scaffold_4175_c_2
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(657..842)
DNA (186bp) protein (62aa)
50S ribosomal protein L37e n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DS22_METV3 rbh
rpl37e; 50S ribosomal protein L37; K02922 large subunit ribosomal protein L37e Tax=RBG_16_Micrarchaeota_49_10_curated
50S ribosomal protein L37e
cg2_3.0_scaffold_4175_c_3
unknown

Not on your lists

comp(904..1050)
DNA (147bp) protein (49aa)

This feature has no annotations

cg2_3.0_scaffold_4175_c_4
unknown

Not on your lists

comp(1298..1711)
DNA (414bp) protein (138aa)

This feature has no annotations

cg2_3.0_scaffold_4175_c_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(1844..2062)
DNA (219bp) protein (73aa)
like-Sm ribonucleoprotein core; K04796 small nuclear ribonucleoprotein Tax=CG_Aenigma_01
Small nuclear ribonucleoprotein, LSM family; K04796 small nuclear ribonucleoprotein id=5044331 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
small nuclear ribonucleoprotein
cg2_3.0_scaffold_4175_c_6
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

2201..2563
DNA (363bp) protein (121aa)
30S ribosomal protein S8e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXJ1_METFV rbh
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e Tax=CG_Aenigma_01
30S ribosomal protein S8e
cg2_3.0_scaffold_4175_c_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(2628..3653)
DNA (1026bp) protein (342aa)
peptidase S58 DmpA; K01266 D-aminopeptidase [EC:3.4.11.19] Tax=CG_Aenigma_01
Peptidase S58 DmpA n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA80_ANADF
peptidase S58 DmpA
cg2_3.0_scaffold_4175_c_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

3784..4236
DNA (453bp) protein (151aa)
Flavodoxin n=3 Tax=Pyrococcus furiosus RepID=I6U688_9EURY
flavodoxin Tax=CG_Aenigma_01
flavodoxin
cg2_3.0_scaffold_4175_c_9
unknown

Not on your lists

4243..4359
DNA (117bp) protein (39aa)

This feature has no annotations

cg2_3.0_scaffold_4175_c_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

4380..4736
DNA (357bp) protein (119aa)
Tax=CG_Aenigma_01
cg2_3.0_scaffold_4175_c_11
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(4766..5503)
DNA (738bp) protein (246aa)
CoB--CoM heterodisulfide reductase (EC:1.8.98.1) Tax=CG_Aenigma_01
CoB--CoM heterodisulfide reductase (EC:1.8.98.1)
CoB--CoM heterodisulfide reductase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX94_FERPA rbh
cg2_3.0_scaffold_4175_c_12
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(5504..6286)
DNA (783bp) protein (261aa)
cytochrome c biogenesis protein Tax=CG_Aenigma_01
Cytochrome c biogenesis protein, transmembrane region id=2837817 bin=GWF2_CPR3_35_18 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_CPR3_35_18 organism_group=CPR3
cytochrome c biogenesis transmembrane protein
cg2_3.0_scaffold_4175_c_13
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(6273..6833)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX08_9BACT
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
cg2_3.0_scaffold_4175_c_14
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

6861..7010
DNA (150bp) protein (50aa)
Tax=CG_Aenigma_01
cg2_3.0_scaffold_4175_c_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(6991..7488)
DNA (498bp) protein (166aa)
hypothetical protein
PIN domain-like Tax=CG_Aenigma_01
PIN domain-like id=5241070 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
cg2_3.0_scaffold_4175_c_16
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(7485..8084)
DNA (600bp) protein (200aa)
HAD superfamily hydrolase n=1 Tax=Caloramator australicus RC3 RepID=I7LJD8_9CLOT
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=CG_Aenigma_01
HAD family hydrolase
cg2_3.0_scaffold_4175_c_17
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(8084..9361)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J4P3_DESMD
lactate utilization protein B/C Tax=CG_Aenigma_01
lactate utilization protein B/C
cg2_3.0_scaffold_4175_c_18
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

9442..9909
DNA (468bp) protein (156aa)
Marine sediment metagenome DNA, contig: S01H1_S11701 Tax=CG_Aenigma_01
cg2_3.0_scaffold_4175_c_19
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

9975..10244
DNA (270bp) protein (90aa)
Tax=CG_Aenigma_01
cg2_3.0_scaffold_4175_c_20
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(10411..11577)
DNA (1167bp) protein (389aa)
aspartate aminotransferase; K10907 aminotransferase [EC:2.6.1.-] Tax=CG_Aenigma_01
Aspartate aminotransferase n=1 Tax=Pyrococcus sp. ST04 RepID=I3REY0_9EURY rbh
aspartate aminotransferase
cg2_3.0_scaffold_4175_c_21
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(11615..11962)
DNA (348bp) protein (116aa)
Tax=CG_Aenigma_01
cg2_3.0_scaffold_4175_c_22
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

12174..12641
DNA (468bp) protein (156aa)
Tax=CG_Aenigma_01
cg2_3.0_scaffold_4175_c_23
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

12674..13426
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZCF0_9CREN rbh
hypothetical protein Tax=CG_Aenigma_01
Putative deoxyribonuclease YcfH
cg2_3.0_scaffold_4175_c_24
unknown

Not on your lists

comp(13527..13622)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 25 items

View Taxonomy