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cg2_3.0_scaffold_3024_c

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3024_c_1
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

147..956
DNA (810bp) protein (270aa)
Electron transport complex protein RnfB n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PBL3_DEFDS
rnfB; electron transport complex protein RnfB Tax=CG_Omnitr_02
rnfB; electron transport complex protein RnfB
cg2_3.0_scaffold_3024_c_2
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(925..2376)
DNA (1452bp) protein (484aa)
pilQ; pili assembly protein PilQ; K02666 type IV pilus assembly protein PilQ Tax=CG_Omnitr_02
Type IV pilin multimeric outer membrane protein id=4474248 bin=GWC2_OP3-like_45_7 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
pilQ; pili assembly protein PilQ
cg2_3.0_scaffold_3024_c_3
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(2373..2828)
DNA (456bp) protein (152aa)
Tax=CG_Omnitr_02
cg2_3.0_scaffold_3024_c_4
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(2825..3391)
DNA (567bp) protein (189aa)
hypothetical protein; K02664 type IV pilus assembly protein PilO Tax=CG_Omnitr_02
Tfp pilus assembly protein PilO id=2742495 bin=GWC2_Planctomycetes_45_44 species=unknown genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
cg2_3.0_scaffold_3024_c_5
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(3388..4038)
DNA (651bp) protein (217aa)
Tax=CG_Omnitr_02
cg2_3.0_scaffold_3024_c_6
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(4279..5253)
DNA (975bp) protein (325aa)
pilM; type IV pilus biogenesis ATPase PilM; K02662 type IV pilus assembly protein PilM Tax=CG_Omnitr_02
Type IV pilus assembly protein PilM id=2024182 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
pilM; type IV pilus biogenesis ATPase PilM
cg2_3.0_scaffold_3024_c_7
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(5399..6226)
DNA (828bp) protein (276aa)
ferredoxin-NADP(+) reductase subunit alpha (EC:1.97.-.-); K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] Tax=CG_Omnitr_02
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HNJ2_9FIRM
oxidoreductase FAD/NAD(P)-binding domain-containing protein
cg2_3.0_scaffold_3024_c_8
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(6254..6655)
DNA (402bp) protein (134aa)
Nucleotide binding protein PINc n=1 Tax=Leptospirillum sp. Group IV 'UBA BS' RepID=T0XZH7_9BACT
protein of unknown function DUF132 Tax=CG_Omnitr_02
protein of unknown function DUF132
cg2_3.0_scaffold_3024_c_9
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(6639..6857)
DNA (219bp) protein (73aa)
Putative transcriptional regulator, CopG family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRX7_9DELT
hypothetical protein Tax=CG_Omnitr_02
hypothetical protein
cg2_3.0_scaffold_3024_c_10
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(6987..7616)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00036D8AA3
GCN5-like N-acetyltransferase Tax=CG_Omnitr_02
GCN5-like N-acetyltransferase
cg2_3.0_scaffold_3024_c_11
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(7681..8823)
DNA (1143bp) protein (381aa)
Tax=CG_Omnitr_02
cg2_3.0_scaffold_3024_c_12
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(9228..10514)
DNA (1287bp) protein (429aa)
3-hexulose-6-phosphate synthase (EC:4.1.2.43); K13831 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27] Tax=CG_Omnitr_02
3-hexulose-6-phosphate synthase (EC:4.1.2.43)
Thiamine monophosphate synthase id=4940351 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
cg2_3.0_scaffold_3024_c_13
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(10793..11473)
DNA (681bp) protein (227aa)
TolQ protein; K03562 biopolymer transport protein TolQ Tax=CG_Omnitr_02
TolQ protein id=3703949 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
TolQ protein
cg2_3.0_scaffold_3024_c_14
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(11659..12351)
DNA (693bp) protein (231aa)
UPI0003CE08E3 related cluster n=1 Tax=unknown RepID=UPI0003CE08E3
Integrase core domain-containing protein Tax=CG_Omnitr_02
Integrase core domain-containing protein
cg2_3.0_scaffold_3024_c_15
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(12765..14162)
DNA (1398bp) protein (466aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KCL0_HALHC
3-deoxy-D-manno-octulosonic-acid transferase Tax=CG_Omnitr_02
3-deoxy-D-manno-octulosonic-acid transferase
cg2_3.0_scaffold_3024_c_16
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(14169..15374)
DNA (1206bp) protein (402aa)
MiaB family RNA modification protein (EC:1.3.1.74); K08070 2-alkenal reductase [EC:1.3.1.74] Tax=CG_Omnitr_02
RNA modification enzyme, MiaB family n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SC40_CALK2
RNA modification enzyme, miab family
cg2_3.0_scaffold_3024_c_17
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(15418..16308)
DNA (891bp) protein (297aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] Tax=CG_Omnitr_02
NadC; nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] id=14426446 bin=bin1_lowGC species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Displaying 17 items

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