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cg2_3.0_scaffold_5285_c

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_5285_c_1
unknown

Not on your lists

comp(3..152)
DNA (150bp) protein (50aa)

This feature has no annotations

cg2_3.0_scaffold_5285_c_2
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(184..762)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000372FB34
hypothetical protein Tax=CG_Omnitr_02
hypothetical protein
cg2_3.0_scaffold_5285_c_3
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(790..2043)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B79183
putative ATPase (AAA+ superfamily) Tax=CG_Omnitr_02
putative ATPase (AAA+ superfamily)
cg2_3.0_scaffold_5285_c_4
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(2110..2844)
DNA (735bp) protein (245aa)
pantothenate kinase (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=CG_Omnitr_02
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase id=4940151 bin=GWA2_Deltaproteo_65_63 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
cg2_3.0_scaffold_5285_c_5
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(2848..3798)
DNA (951bp) protein (317aa)
Curli production assembly/transport component CsgG Tax=CG_Omnitr_02
Uncharacterized protein id=4202183 bin=GWF2_Lentisphaerae_57_35 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Curli production assembly/transport component CsgG
cg2_3.0_scaffold_5285_c_6
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(3824..4246)
DNA (423bp) protein (141aa)
Tax=CG_Omnitr_02
cg2_3.0_scaffold_5285_c_7
RLO_WOR_2_51_8, WOR-2, Bacteria

Not on your lists

4295..4951
DNA (657bp) protein (219aa)
HAD-superfamily hydrolase, subfamily IA, variant 1, partial id=3984122 bin=GWF2_OP3_43_52 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
HAD-superfamily hydrolase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_8_curated
cg2_3.0_scaffold_5285_c_8
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(5177..6097)
DNA (921bp) protein (307aa)
DNA polymerase III, delta' subunit n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K468_HALHC
DNA polymerase III, delta' subunit Tax=CG_Omnitr_02
DNA polymerase III, delta' subunit
cg2_3.0_scaffold_5285_c_9
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(6131..6754)
DNA (624bp) protein (208aa)
dTMP kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=CG_Omnitr_02
dTMP kinase (EC:2.7.4.9)
Thymidylate kinase id=1251396 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
cg2_3.0_scaffold_5285_c_10
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(6767..7864)
DNA (1098bp) protein (366aa)
tRNA-guanine transglycosylase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=CG_Omnitr_02
tRNA-guanine transglycosylase (EC:2.4.2.29)
queuine tRNA-ribosyltransferase n=1 Tax=Peptoniphilus lacrimalis RepID=UPI00036F90F0
cg2_3.0_scaffold_5285_c_11
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(7839..8267)
DNA (429bp) protein (143aa)
Marine sediment metagenome DNA, contig: S03H2_S04675 Tax=CG_Omnitr_02
cg2_3.0_scaffold_5285_c_12
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists


comp(8285..9241)
DNA (957bp) protein (319aa)
metalloendopeptidase glycoprotease family (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=CG_Omnitr_02
metalloendopeptidase glycoprotease family (EC:3.4.24.57)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=3383127 bin=GWC2_Planctomycetes_45_44 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
cg2_3.0_scaffold_5285_c_13
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(9351..10181)
DNA (831bp) protein (277aa)
hypothetical protein Tax=CG_Omnitr_02
Putative uncharacterized protein id=4074271 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
cg2_3.0_scaffold_5285_c_14
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(10178..11353)
DNA (1176bp) protein (392aa)
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102) Tax=CG_Omnitr_02
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102)
Carboxy-terminal processing protease id=2185488 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cg2_3.0_scaffold_5285_c_15
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(11350..11976)
DNA (627bp) protein (209aa)
Putative cell-wall associated endopeptidase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AEA5_CARHZ
peptidoglycan-binding lipoprotein, SPOR/NLPC_P60 domain-containing protein Tax=CG_Omnitr_02
cell-wall associated endopeptidase
Displaying 15 items

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