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cg2_3.0_scaffold_1256_c

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1256_c_1
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..478
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000374F7A6
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg2_3.0_scaffold_1256_c_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

511..1008
DNA (498bp) protein (166aa)
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=CG_Hydro_01
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
cyclophilin n=1 Tax=Thiobacillus thioparus RepID=UPI0003604044
cg2_3.0_scaffold_1256_c_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

998..1732
DNA (735bp) protein (245aa)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJN6_9PROT
UDP-2,3-diacylglucosamine hydrolase Tax=CG_Hydro_01
UDP-2,3-diacylglucosamine hydrolase
cg2_3.0_scaffold_1256_c_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1733..2908)
DNA (1176bp) protein (392aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] Tax=CG_Hydro_01
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
O-succinylhomoserine sulfhydrylase id=1329864 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cg2_3.0_scaffold_1256_c_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2898..4439)
DNA (1542bp) protein (514aa)
Amidophosphoribosyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9U7_9PROT
amidophosphoribosyltransferase Tax=CG_Hydro_01
amidophosphoribosyltransferase
cg2_3.0_scaffold_1256_c_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4451..4939)
DNA (489bp) protein (163aa)
Colicin V production protein n=2 Tax=Methylovorus RepID=C6XE11_METSD
colicin V production protein; K03558 membrane protein required for colicin V production Tax=CG_Hydro_01
cvpA; colicin v production protein
cg2_3.0_scaffold_1256_c_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4936..5574)
DNA (639bp) protein (213aa)
Membrane protein n=2 Tax=Bordetella holmesii RepID=M5NQG8_9BORD
sporulation domain-containing protein; K03749 DedD protein Tax=CG_Hydro_01
sporulation related
cg2_3.0_scaffold_1256_c_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5567..6826)
DNA (1260bp) protein (420aa)
FolC bifunctional protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B258_9PROT
FolC bifunctional protein Tax=CG_Hydro_01
FolC bifunctional protein
cg2_3.0_scaffold_1256_c_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6827..7693)
DNA (867bp) protein (289aa)
acetyl-CoA carboxylase carboxyl transferase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI0003683C70
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=CG_Hydro_01
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
cg2_3.0_scaffold_1256_c_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7704..8501)
DNA (798bp) protein (266aa)
tryptophan synthase, subunit alpha (EC:4.2.1.20) Tax=CG_Hydro_01
tryptophan synthase, subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9U6_9PROT
cg2_3.0_scaffold_1256_c_11
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8503..9702)
DNA (1200bp) protein (400aa)
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=CG_Hydro_01
tryptophan synthase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI0003649646
tryptophan synthase subunit beta
cg2_3.0_scaffold_1256_c_12
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9689..10312)
DNA (624bp) protein (208aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=CG_Hydro_01
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUF7_SIDLE
cg2_3.0_scaffold_1256_c_13
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10309..11094)
DNA (786bp) protein (262aa)
pseudouridylate synthase I; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=CG_Hydro_01
tRNA pseudouridine synthase A n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIR6_AZOSU
pseudouridylate synthase I
cg2_3.0_scaffold_1256_c_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11082..11684)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037BDAB8
hypothetical protein; K02008 cobalt/nickel transport system permease protein Tax=CG_Hydro_01
hypothetical protein
cg2_3.0_scaffold_1256_c_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11685..14249)
DNA (2565bp) protein (855aa)
hypothetical protein Tax=CG_Hydro_01
hypothetical protein; K08086 pilus assembly protein FimV id=12493948 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
cg2_3.0_scaffold_1256_c_16
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14448..15560)
DNA (1113bp) protein (371aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=CG_Hydro_01
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=1333553 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cg2_3.0_scaffold_1256_c_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15586..16647)
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=CG_Hydro_01
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase id=1333552 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cg2_3.0_scaffold_1256_c_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16667..17305)
DNA (639bp) protein (213aa)
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=CG_Hydro_01
3-isopropylmalate dehydratase small subunit n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QI54_METS6
leuD; 3-isopropylmalate dehydratase small subunit
cg2_3.0_scaffold_1256_c_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17305..17466)
DNA (162bp) protein (54aa)
Tax=CG_Hydro_01
cg2_3.0_scaffold_1256_c_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17463..18884)
DNA (1422bp) protein (474aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=CG_Hydro_01
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRS9_ACCPU
cg2_3.0_scaffold_1256_c_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18958..20112)
DNA (1155bp) protein (385aa)
transporter Tax=CG_Hydro_01
Putative transporter id=1333548 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transporter
cg2_3.0_scaffold_1256_c_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20183..20419)
DNA (237bp) protein (79aa)
GTP-binding protein n=1 Tax=Leucothrix mucor RepID=UPI0003B5682B
hypothetical protein; K09794 hypothetical protein Tax=CG_Hydro_01
GTP-binding protein
cg2_3.0_scaffold_1256_c_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20442..21542)
DNA (1101bp) protein (367aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=CG_Hydro_01
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=AROC_NITMU rbh
cg2_3.0_scaffold_1256_c_24
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21577..23118)
DNA (1542bp) protein (514aa)
leucyl aminopeptidase (EC:3.4.11.1) Tax=CG_Hydro_01
leucyl aminopeptidase (EC:3.4.11.1)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] id=12498120 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cg2_3.0_scaffold_1256_c_25
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23306..25978
DNA (2673bp) protein (891aa)
aceE; 2-oxo-acid dehydrogenase e1 subunit; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=CG_Hydro_01
Pyruvate dehydrogenase E1 component n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QJU2_METS6
aceE; 2-oxo-acid dehydrogenase e1 subunit
cg2_3.0_scaffold_1256_c_26
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25992..27320
DNA (1329bp) protein (443aa)
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=CG_Hydro_01
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (EC:2.3.1.12)
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XAH4_METSD
cg2_3.0_scaffold_1256_c_27
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27394..27924
DNA (531bp) protein (177aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=CG_Hydro_01
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGU6_9PROT
dihydrolipoamide dehydrogenase
Displaying 27 items

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