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cg2_3.0_scaffold_3208_c

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3208_c_1
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..132
DNA (132bp) protein (44aa)
hypothetical protein Tax=CG_Hydro_01
cg2_3.0_scaffold_3208_c_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246..593
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLD2_9ZZZZ
Uncharacterized protein Tax=CG_Hydro_01
cg2_3.0_scaffold_3208_c_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

604..1128
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLD1_9ZZZZ
Uncharacterized protein Tax=CG_Hydro_01
cg2_3.0_scaffold_3208_c_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1232..1855
DNA (624bp) protein (208aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=CG_Hydro_01
riboflavin synthase subunit alpha (EC:2.5.1.9)
Lumazine-binding protein id=1329922 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cg2_3.0_scaffold_3208_c_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1857..2951
DNA (1095bp) protein (365aa)
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein (EC:4.1.2.- 3.5.4.25); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein (EC:3.5.4.25 4.1.2.-)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGV0_THIDA
cg2_3.0_scaffold_3208_c_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2953..3423
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Azoarcus sp. (strain BH72) RepID=RISB_AZOSB rbh
ribH; riboflavin synthase subunit beta Tax=CG_Hydro_01
ribH; riboflavin synthase subunit beta
cg2_3.0_scaffold_3208_c_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3420..3863
DNA (444bp) protein (148aa)
nitrogen utilization protein B n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D8DA16
transcription antitermination protein NusB; K03625 N utilization substance protein B Tax=CG_Hydro_01
transcription antitermination protein NusB
cg2_3.0_scaffold_3208_c_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3873..4847
DNA (975bp) protein (325aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=CG_Hydro_01
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGU7_THIDA
cg2_3.0_scaffold_3208_c_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4931..5344
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q478Z8_DECAR
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg2_3.0_scaffold_3208_c_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5410..5937)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UA12_9GAMM
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg2_3.0_scaffold_3208_c_11
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6086..6547
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037D70BF
hypothetical protein Tax=CG_Hydro_01
membrane protein
cg2_3.0_scaffold_3208_c_12
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6581..7222)
DNA (642bp) protein (214aa)
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] Tax=CG_Hydro_01
Class II aldolase/adducin family protein n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QL24_METS6
class II aldolase/adducin family protein
cg2_3.0_scaffold_3208_c_trna_1
unknown

Not on your lists

7300..7372
DNA (73bp)
transferRNA
cg2_3.0_scaffold_3208_c_trna_2
unknown

Not on your lists

7436..7506
DNA (71bp)
transferRNA
cg2_3.0_scaffold_3208_c_trna_3
unknown

Not on your lists

7543..7624
DNA (82bp)
transferRNA
cg2_3.0_scaffold_3208_c_13
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7726..8151
DNA (426bp) protein (142aa)
hypothetical protein; K09748 ribosome maturation factor RimP Tax=CG_Hydro_01
Ribosome maturation factor RimP id=1936096 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
cg2_3.0_scaffold_3208_c_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8168..9643
DNA (1476bp) protein (492aa)
Peptidase M54 n=2 Tax=Pandoraea RepID=V5UL67_9BURK
nusA; transcription elongation factor NusA Tax=CG_Hydro_01
nusA; transcription elongation factor NusA
cg2_3.0_scaffold_3208_c_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9667..12231
DNA (2565bp) protein (855aa)
translation initiation factor IF-2 n=1 Tax=Thiobacillus thioparus RepID=UPI000364F979
infB; translation initiation factor 2 Tax=CG_Hydro_01
infB; translation initiation factor IF-2
cg2_3.0_scaffold_3208_c_16
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12312..12698
DNA (387bp) protein (129aa)
Ribosome-binding factor A n=1 Tax=Thauera sp. 63 RepID=N6Y3Z1_9RHOO
ribosome-binding factor A; K02834 ribosome-binding factor A Tax=CG_Hydro_01
ribosome-binding factor A
cg2_3.0_scaffold_3208_c_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12698..13585
DNA (888bp) protein (296aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=CG_Hydro_01
tRNA pseudouridine synthase B n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZJR7_THASP
truB; tRNA pseudouridine synthase B
cg2_3.0_scaffold_3208_c_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13719..13988
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Azoarcus sp. (strain BH72) RepID=RS15_AZOSB rbh
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=CG_Hydro_01
rpsO; 30S ribosomal protein S15
cg2_3.0_scaffold_3208_c_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14033..16153
DNA (2121bp) protein (707aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=CG_Hydro_01
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=PNP_THIDA rbh
polynucleotide phosphorylase
cg2_3.0_scaffold_3208_c_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16441..17607)
DNA (1167bp) protein (389aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=CG_Hydro_01
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=12493576 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Displaying 23 items

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