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cg2_3.0_scaffold_2323_c

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2323_c_1
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1024)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037B9A37
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg2_3.0_scaffold_2323_c_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1035..1259)
DNA (225bp) protein (75aa)
Transcriptional regulator n=1 Tax=sediment metagenome RepID=D9PIP2_9ZZZZ
phage regulatory protein, AlpA family Tax=CG_Hydro_01
hypothetical protein
cg2_3.0_scaffold_2323_c_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1550..2818)
DNA (1269bp) protein (423aa)
integrase n=1 Tax=Pseudomonas fluorescens RepID=UPI00037D0E4C
phage integrase family protein Tax=CG_Hydro_01
phage integrase family protein
cg2_3.0_scaffold_2323_c_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3012..4097)
DNA (1086bp) protein (362aa)
Ribosome-binding ATPase YchF n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCU1_GALCS
GTP-binding protein YchF; K06942 Tax=CG_Hydro_01
GTP-binding protein YchF
cg2_3.0_scaffold_2323_c_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4094..4690)
DNA (597bp) protein (199aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=CG_Hydro_01
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=PTH_THIDA rbh
cg2_3.0_scaffold_2323_c_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4703..5344)
DNA (642bp) protein (214aa)
50S ribosomal protein L25 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJL4_AZOSU
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=CG_Hydro_01
50S ribosomal protein L25
cg2_3.0_scaffold_2323_c_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5453..6403)
DNA (951bp) protein (317aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=CG_Hydro_01
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Thiobacillus denitrificans RepID=UPI000370927D
cg2_3.0_scaffold_2323_c_trna_1
unknown

Not on your lists

comp(6478..6549)
DNA (72bp)
transferRNA
cg2_3.0_scaffold_2323_c_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6561..7400)
DNA (840bp) protein (280aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148) Tax=CG_Hydro_01
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADF4_9PROT
cg2_3.0_scaffold_2323_c_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7397..7975)
DNA (579bp) protein (193aa)
membrane protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003B524A4
lolB; outer membrane lipoprotein LolB Tax=CG_Hydro_01
lolB; outer membrane lipoprotein LolB
cg2_3.0_scaffold_2323_c_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7981..9690)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB05_9PROT
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg2_3.0_scaffold_2323_c_11
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9762..10577
DNA (816bp) protein (272aa)
formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=CG_Hydro_01
Formamidopyrimidine-DNA glycosylase n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9YZ64_9NEIS
formamidopyrimidine-DNA glycosylase
cg2_3.0_scaffold_2323_c_12
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10639..12597
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X7R1_METSD
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg2_3.0_scaffold_2323_c_13
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12630..12881)
DNA (252bp) protein (84aa)
ferredoxin n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036D26BD
fdx; ferredoxin protein Tax=CG_Hydro_01
ferredoxin
cg2_3.0_scaffold_2323_c_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12894..13403)
DNA (510bp) protein (170aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=CG_Hydro_01
phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] id=12495679 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
cg2_3.0_scaffold_2323_c_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13400..13948)
DNA (549bp) protein (183aa)
N6-adenine-specific methylase (EC:2.1.1.52) Tax=CG_Hydro_01
N6-adenine-specific methylase (EC:2.1.1.52)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI0003601567
cg2_3.0_scaffold_2323_c_16
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13926..15251)
DNA (1326bp) protein (442aa)
Zn dependent peptidase; K01422 [EC:3.4.99.-] Tax=CG_Hydro_01
Probable Zn dependent peptidase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K3H6_AZOSB
Zn dependent peptidase
cg2_3.0_scaffold_2323_c_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15241..16620)
DNA (1380bp) protein (460aa)
Peptidase M16-like protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B7M7_9PROT
peptidase M16-like protein Tax=CG_Hydro_01
peptidase M16-like protein
cg2_3.0_scaffold_2323_c_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16691..17695
DNA (1005bp) protein (335aa)
Signal recognition particle receptor FtsY n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADG0_9PROT
signal recognition particle-docking protein FtsY Tax=CG_Hydro_01
signal recognition particle-docking protein FtsY
cg2_3.0_scaffold_2323_c_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17703..18356
DNA (654bp) protein (218aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000370645D
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=CG_Hydro_01
cell division ATP-binding protein FtsE
cg2_3.0_scaffold_2323_c_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18353..19252
DNA (900bp) protein (300aa)
cell division protein FtsX; K09811 cell division transport system permease protein Tax=CG_Hydro_01
cell division protein FtsX; K09811 cell division transport system permease protein id=12495685 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
cg2_3.0_scaffold_2323_c_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19315..20661)
DNA (1347bp) protein (449aa)
Sensor histidine kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIH4_9PROT
sensor histidine kinase Tax=CG_Hydro_01
sensor histidine kinase
cg2_3.0_scaffold_2323_c_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20661..21320)
DNA (660bp) protein (220aa)
Winged helix family two component transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9L5_9PROT
winged helix family two component transcriptional regulator Tax=CG_Hydro_01
winged helix family two component transcriptional regulator
cg2_3.0_scaffold_2323_c_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21451..21654)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4S9_9GAMM
hypothetical protein
Putative uncharacterized protein Tax=CG_Hydro_01
cg2_3.0_scaffold_2323_c_24
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21651..21743)
DNA (93bp) protein (31aa)
electron transport complex, RnfABCDGE type, A subunit Tax=CG_Hydro_01
Displaying 25 items

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