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cg2_3.0_scaffold_289_c

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_289_c_1
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..3125
DNA (3123bp) protein (1041aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRV6_SIDLE
diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Tax=CG_Hydro_01
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
cg2_3.0_scaffold_289_c_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3271..5433)
DNA (2163bp) protein (721aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Y9_9PROT
(p)ppGpp synthetase I SpoT/RelA Tax=CG_Hydro_01
(p)ppGpp synthetase I SpoT/RelA
cg2_3.0_scaffold_289_c_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5484..6275)
DNA (792bp) protein (264aa)
Outer membrane protein assembly factor BamD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKL7_THIDA
putative competence lipoprotein; K05807 putative lipoprotein Tax=CG_Hydro_01
competence lipoprotein
cg2_3.0_scaffold_289_c_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6315..7235
DNA (921bp) protein (307aa)
pseudouridine synthase, RluA family; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=CG_Hydro_01
Pseudouridine synthase n=1 Tax=Thauera sp. 63 RepID=N6XE14_9RHOO
pseudouridine synthase, RluA family
cg2_3.0_scaffold_289_c_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7225..7974
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PW97_9RHOO
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg2_3.0_scaffold_289_c_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8315..17059)
DNA (8745bp) protein (2915aa)
putative glycosyltransferase 36 Tax=CG_Hydro_01
NdvB
Putative uncharacterized protein id=1868419 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cg2_3.0_scaffold_289_c_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17275..17559
DNA (285bp) protein (95aa)
Tax=CG_Hydro_01
cg2_3.0_scaffold_289_c_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17642..18955
DNA (1314bp) protein (438aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B510_9PROT
rimO; hypothetical protein Tax=CG_Hydro_01
rimO; hypothetical protein
cg2_3.0_scaffold_289_c_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18952..19416
DNA (465bp) protein (155aa)
NUDIX hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ97_9PROT
NUDIX hydrolase Tax=CG_Hydro_01
NUDIX hydrolase
cg2_3.0_scaffold_289_c_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19413..20483
DNA (1071bp) protein (357aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=CG_Hydro_01
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] id=12497009 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
cg2_3.0_scaffold_289_c_11
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20588..21319)
DNA (732bp) protein (244aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=CG_Hydro_01
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA51_NITMU
uroporphyrin-III C/tetrapyrrole methyltransferase
cg2_3.0_scaffold_289_c_12
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21323..21916)
DNA (594bp) protein (198aa)
septum formation protein Maf n=1 Tax=Thiobacillus thioparus RepID=UPI00036F81F4
Maf-like protein; K06287 septum formation protein Tax=CG_Hydro_01
Maf-like protein
cg2_3.0_scaffold_289_c_13
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21960..23816)
DNA (1857bp) protein (619aa)
pyruvate carboxylase subunit B (EC:4.1.1.3); K01960 pyruvate carboxylase subunit B [EC:6.4.1.1] Tax=CG_Hydro_01
pyruvate carboxylase subunit B (EC:4.1.1.3); K01960 pyruvate carboxylase subunit B [EC:6.4.1.1] id=12497577 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pyruvate carboxylase subunit B (EC:4.1.1.3)
cg2_3.0_scaffold_289_c_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23834..25252)
DNA (1419bp) protein (473aa)
Pyruvate carboxylase subunit A n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AH10_9PROT
pyruvate carboxylase subunit A Tax=CG_Hydro_01
pyruvate carboxylase subunit A
cg2_3.0_scaffold_289_c_trna_1
unknown

Not on your lists

comp(25460..25532)
DNA (73bp)
transferRNA
cg2_3.0_scaffold_289_c_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25523..26635)
DNA (1113bp) protein (371aa)
Glycine oxidase ThiO n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAI7_9PROT
glycine oxidase ThiO Tax=CG_Hydro_01
glycine oxidase ThiO
cg2_3.0_scaffold_289_c_16
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26684..27652
DNA (969bp) protein (323aa)
birA; biotin acetyl-CoA-carboxylase synthetase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=CG_Hydro_
birA; biotin acetyl-CoA-carboxylase synthetase (EC:6.3.4.15)
Biotin acetyl-CoA-carboxylase synthetase n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7P0T0_CHRVO
cg2_3.0_scaffold_289_c_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27652..28401
DNA (750bp) protein (250aa)
putative transcriptional acitvator, Baf; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=CG_Hydro_01
Type III pantothenate kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=COAX_THIDA rbh
transcriptional acitvator, Baf
cg2_3.0_scaffold_289_c_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28365..29075
DNA (711bp) protein (237aa)
Tax=CG_Hydro_01
cg2_3.0_scaffold_289_c_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29056..30720)
DNA (1665bp) protein (555aa)
hypothetical protein Tax=CG_Hydro_01
hypothetical protein id=12497734 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
cg2_3.0_scaffold_289_c_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30736..33363)
DNA (2628bp) protein (876aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Hydro_01
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CU19_SIDLE
cg2_3.0_scaffold_289_c_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33453..34028)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00036E9554
response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain-containing protein Tax=CG_Hydro_01
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
cg2_3.0_scaffold_289_c_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34047..34508)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037457D5
putative sensory box GGDEF/EAL domain-containing protein Tax=CG_Hydro_01
putative sensory box GGDEF/EAL domain-containing protein
cg2_3.0_scaffold_289_c_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34696..35022
DNA (327bp) protein (109aa)
sulfurtransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00038011A3
rhodanese-like protein Tax=CG_Hydro_01
rhodanese-like protein
cg2_3.0_scaffold_289_c_24
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35181..35408
DNA (228bp) protein (76aa)
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=CG_Hydro_01
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL89_THIDA
hypothetical protein
cg2_3.0_scaffold_289_c_25
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35516..36025
DNA (510bp) protein (170aa)
hypothetical protein Tax=CG_Hydro_01
hypothetical protein id=12495204 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
cg2_3.0_scaffold_289_c_26
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36224..37531
DNA (1308bp) protein (436aa)
aromatic hydrocarbon degradation membrane protein Tax=CG_Hydro_01
Uncharacterized protein id=3587208 bin=GWC2_Nitrospirae-rel_56_14 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
aromatic hydrocarbon degradation membrane protein
cg2_3.0_scaffold_289_c_27
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37684..38496)
DNA (813bp) protein (271aa)
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase (EC:1.4.3.3); K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] Tax=CG_Hydro_01
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase (EC:1.4.3.3)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Azoarcus sp. (strain BH72) RepID=MNMC_AZOSB rbh
cg2_3.0_scaffold_289_c_28
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38704..40266
DNA (1563bp) protein (521aa)
Amylopullulanase (EC:3.2.1.41 3.2.1.1)
Glycoside hydrolase, family 57 n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUT3_9GAMM
glycoside hydrolase family protein Tax=CG_Hydro_01
cg2_3.0_scaffold_289_c_29
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40385..43273
DNA (2889bp) protein (963aa)
Molybdopterin oxidoreductase n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DFV6_9GAMM
molybdopterin oxidoreductase Tax=CG_Hydro_01
formate dehydrogenase
Displaying items 1-30 of 38 in total

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