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cg2_3.0_scaffold_313_c

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_313_c_1
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

42..422
DNA (381bp) protein (127aa)
Tax=CG_Berkel_01
cg2_3.0_scaffold_313_c_2
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(657..992)
DNA (336bp) protein (112aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SU86_9BACT
hypothetical protein Tax=CG_Berkel_01
hypothetical protein
cg2_3.0_scaffold_313_c_3
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(979..1278)
DNA (300bp) protein (100aa)
Putative uncharacterized protein C4_0008 n=3 Tax=environmental samples RepID=Q2Y4S5_9ARCH id=129837 bin=ACD7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein Tax=CG_Berkel_01
hypothetical protein
cg2_3.0_scaffold_313_c_4
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

1511..1933
DNA (423bp) protein (141aa)
Tax=CG_Berkel_01
cg2_3.0_scaffold_313_c_5
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

2285..2608
DNA (324bp) protein (108aa)
Tax=CG_Berkel_01
cg2_3.0_scaffold_313_c_6
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(2889..4025)
DNA (1137bp) protein (379aa)
Tax=CG_Berkel_01
cg2_3.0_scaffold_313_c_7
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(4110..4301)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1FET2_AMPQE
hypothetical protein Tax=CG_Berkel_01
hypothetical protein
cg2_3.0_scaffold_313_c_8
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

4629..5459
DNA (831bp) protein (277aa)
Tax=CG_Berkel_01
cg2_3.0_scaffold_313_c_9
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

5608..7479
DNA (1872bp) protein (624aa)
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=CG_Berkel_01
Translation initiation factor IF-2 id=1263914 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
infB; translation initiation factor IF-2
cg2_3.0_scaffold_313_c_10
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

7624..8493
DNA (870bp) protein (290aa)
hypothetical protein Tax=CG_Berkel_01
TIGR00159 family protein id=2603427 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
hypothetical protein
cg2_3.0_scaffold_313_c_11
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

8490..9683
DNA (1194bp) protein (398aa)
hypothetical protein Tax=CG_Berkel_01
hypothetical protein id=15189504 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
hypothetical protein
cg2_3.0_scaffold_313_c_12
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

9898..10998
DNA (1101bp) protein (367aa)
hypothetical protein Tax=CG_Berkel_01
Uncharacterized protein id=1263919 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
hypothetical protein
cg2_3.0_scaffold_313_c_13
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

11097..12068
DNA (972bp) protein (324aa)
GTP-binding protein Obg/CgtA; K03979 GTP-binding protein Tax=CG_Berkel_01
GTP-binding protein Obg/CgtA; K03979 GTP-binding protein id=15189506 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
GTP-binding protein Obg/CgtA
cg2_3.0_scaffold_313_c_14
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(12123..12638)
DNA (516bp) protein (172aa)
Putative cold shock protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9N9_AZOL4
putative cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=CG_Berkel_01
putative cold shock protein
cg2_3.0_scaffold_313_c_15
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

13037..16390
DNA (3354bp) protein (1118aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_Berkel_01
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=1263924 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
cg2_3.0_scaffold_313_c_16
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

16439..20305
DNA (3867bp) protein (1289aa)
DNA-directed RNA polymerase, beta' subunit/160 kD subunit Tax=CG_Berkel_01
hypothetical protein id=5801308 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
DNA-directed RNA polymerase, beta' subunit/160 kD subunit
cg2_3.0_scaffold_313_c_17
RIFOXYA2_FULL_Berkelbacteria_43_10_curated, Berkelbacteria, Bacteria

Not on your lists


20462..20881
DNA (420bp) protein (140aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFOXYA2_FULL_Berkelbacteria_43_10_curated
30S ribosomal protein S12 id=4010280 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
30S ribosomal protein S12
cg2_3.0_scaffold_313_c_18
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


21008..21484
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=RS7_CHLAD rbh
30S ribosomal protein S7 Tax=CG_Berkel_01
30S ribosomal protein S7
cg2_3.0_scaffold_313_c_19
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

21668..21835
DNA (168bp) protein (56aa)
Tax=CG_Berkel_01
cg2_3.0_scaffold_313_c_20
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

21944..22126
DNA (183bp) protein (61aa)
Tax=CG_Berkel_01
cg2_3.0_scaffold_313_c_21
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

22262..24337
DNA (2076bp) protein (692aa)
translation elongation factor g; K02355 elongation factor G Tax=CG_Berkel_01
elongation factor G; K02355 elongation factor G id=15189516 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
translation elongation factor g
cg2_3.0_scaffold_313_c_22
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

24585..25763
DNA (1179bp) protein (393aa)
translation elongation factor Tu (EC:2.7.7.4); K02358 elongation factor Tu Tax=CG_Berkel_01
translation elongation factor Tu (EC:2.7.7.4)
Elongation factor Tu id=2377088 bin=GWD1_TM7_39_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
cg2_3.0_scaffold_313_c_23
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


25786..26112
DNA (327bp) protein (109aa)
rpsJ; 30S ribosomal protein S10 Tax=CG_Berkel_01
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=15189520 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
30S ribosomal protein S10
cg2_3.0_scaffold_313_c_24
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


26160..26783
DNA (624bp) protein (208aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=CG_Berkel_01
50S ribosomal protein L3 id=3158289 bin=GWC1_CPR2_39_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L3
cg2_3.0_scaffold_313_c_25
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


26786..27490
DNA (705bp) protein (235aa)
50S ribosomal protein L4P; K02926 large subunit ribosomal protein L4 Tax=CG_Berkel_01
50S ribosomal protein L4 id=1956470 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L4P
cg2_3.0_scaffold_313_c_26
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


27492..27887
DNA (396bp) protein (132aa)
50S ribosomal protein L23 n=1 Tax=uncultured bacterium RepID=K2CHX2_9BACT
Ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23 Tax=CG_Berkel_01
Ribosomal protein L25/L23
cg2_3.0_scaffold_313_c_27
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


27897..28721
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV19_9CLOT
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=CG_Berkel_01
50S ribosomal protein L2
cg2_3.0_scaffold_313_c_28
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


28723..29058
DNA (336bp) protein (112aa)
rpsS; ribosomal protein S19 (BS19) Tax=CG_Berkel_01
hypothetical protein id=5801575 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
rpsS; ribosomal protein S19 (BS19)
cg2_3.0_scaffold_313_c_29
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


29087..29680
DNA (594bp) protein (198aa)
50S ribosomal protein L22 n=1 Tax=Selenomonas bovis RepID=UPI00037AD772
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=CG_Berkel_01
50S ribosomal protein L22
cg2_3.0_scaffold_313_c_30
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


29664..30332
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0J184_AMPXN
rpsC; 30S ribosomal protein S3 Tax=CG_Berkel_01
rpsC; 30S ribosomal protein S3
Displaying items 1-30 of 61 in total

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