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cg2_3.0_scaffold_2035_c

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2035_c_1
RBG_13_OP11_Woesebacteria_34_9_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2..268)
DNA (267bp) protein (89aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RBG_13_OP11_Woesebacteria_34_9_curated
dev:DhcVS_492 dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-] id=86469 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
hypothetical protein
cg2_3.0_scaffold_2035_c_2
R_RIF_OD1_13_53_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(289..930)
DNA (642bp) protein (214aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_53_17_curated
cg2_3.0_scaffold_2035_c_3
unknown

Not on your lists

comp(1073..1585)
DNA (513bp) protein (171aa)

This feature has no annotations

cg2_3.0_scaffold_2035_c_4
RIFOXYA2_FULL_Berkelbacteria_43_10_curated, Berkelbacteria, Bacteria

Not on your lists

comp(1827..2525)
DNA (699bp) protein (233aa)
Tax=RIFOXYA2_FULL_Berkelbacteria_43_10_curated
cg2_3.0_scaffold_2035_c_5
unknown

Not on your lists

comp(2620..2964)
DNA (345bp) protein (115aa)

This feature has no annotations

cg2_3.0_scaffold_2035_c_6
unknown

Not on your lists

comp(3070..3336)
DNA (267bp) protein (89aa)

This feature has no annotations

cg2_3.0_scaffold_2035_c_7

Not on your lists

3422..4279
DNA (858bp) protein (286aa)
Polysaccharide deacetylase n=1 Tax=uncultured bacterium RepID=K2B2G5_9BACT
Polysaccharide deacetylase {ECO:0000313|EMBL:KKT26236.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
polysaccharide deacetylase
cg2_3.0_scaffold_2035_c_8
unknown

Not on your lists

4439..4876
DNA (438bp) protein (146aa)

This feature has no annotations

cg2_3.0_scaffold_2035_c_9
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(4878..5216)
DNA (339bp) protein (113aa)
hypothetical protein Tax=CG_Berkel_01
hypothetical protein id=42294 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
cg2_3.0_scaffold_2035_c_10
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(5213..6142)
DNA (930bp) protein (310aa)
Filamentation induced by cAMP protein Fic n=1 Tax=uncultured bacterium RepID=K2A6H0_9BACT
fic; Fic family protein Tax=CG_Berkel_01
fic; Fic family protein
cg2_3.0_scaffold_2035_c_11
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(6242..6667)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BJJ2_9EURY rbh
hypothetical protein Tax=CG_Berkel_01
hypothetical protein
cg2_3.0_scaffold_2035_c_12
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

6776..7123
DNA (348bp) protein (116aa)
Tax=CG_Berkel_01
cg2_3.0_scaffold_2035_c_13
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(7179..7448)
DNA (270bp) protein (90aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=CG_Berkel_01
Acylphosphatase id=4721580 bin=GWC2_OP3_44_8 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
acylphosphatase
cg2_3.0_scaffold_2035_c_14
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(7464..7988)
DNA (525bp) protein (175aa)
Rubrerythrin n=1 Tax=uncultured bacterium RepID=K1XD74_9BACT
Rubrerythrin Tax=CG_Berkel_01
Rubrerythrin
cg2_3.0_scaffold_2035_c_15
unknown

Not on your lists

comp(8626..9078)
DNA (453bp) protein (151aa)

This feature has no annotations

cg2_3.0_scaffold_2035_c_16
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(9191..9487)
DNA (297bp) protein (99aa)
hypothetical protein Tax=CG_Berkel_01
hypothetical protein id=41395 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
cg2_3.0_scaffold_2035_c_17
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

9531..10532
DNA (1002bp) protein (334aa)
RNA-directed DNA polymerase Tax=CG_Berkel_01
Retron-type reverse transcriptase id=3736736 bin=GWC2_OD1_43_27 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RNA-directed DNA polymerase
cg2_3.0_scaffold_2035_c_18
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(10714..11100)
DNA (387bp) protein (129aa)
Tax=CG_Berkel_01
cg2_3.0_scaffold_2035_c_trna_1
unknown

Not on your lists

comp(11131..11218)
DNA (88bp)
transferRNA
cg2_3.0_scaffold_2035_c_19
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(11603..13933)
DNA (2331bp) protein (777aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=CG_Berkel_01
Phosphoenolpyruvate synthase id=1263608 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
phosphoenolpyruvate synthase
cg2_3.0_scaffold_2035_c_20
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(14101..14547)
DNA (447bp) protein (149aa)
Regulatory protein RecX n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E0H7_9FIRM
hypothetical protein; K03565 regulatory protein Tax=CG_Berkel_01
RecX family transcriptional regulator
cg2_3.0_scaffold_2035_c_21
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(14659..15189)
DNA (531bp) protein (177aa)
S23 ribosomal protein Tax=CG_Berkel_01
S23 ribosomal protein id=1263477 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
cg2_3.0_scaffold_2035_c_22
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists


comp(15200..16228)
DNA (1029bp) protein (343aa)
recA protein; K03553 recombination protein RecA Tax=CG_Berkel_01
recA protein; K03553 recombination protein RecA id=15189186 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
recA protein
cg2_3.0_scaffold_2035_c_23
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(16255..16947)
DNA (693bp) protein (231aa)
transcriptional regulator, XRE family Tax=CG_Berkel_01
XRE family transcriptional regulator id=87064 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
transcriptional regulator, XRE family
cg2_3.0_scaffold_2035_c_24
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(17063..19276)
DNA (2214bp) protein (738aa)
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=CG_Berkel_01
toc:Toce_1223 DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family id=87081 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
DNA translocase FtsK
cg2_3.0_scaffold_2035_c_25
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(19376..21187)
DNA (1812bp) protein (604aa)
rnjA; ribonuclease J 1 (EC:3.1.-.-) Tax=CG_Berkel_01
rnjA; ribonuclease J 1 (EC:3.1.-.-)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1XCY8_9BACT
cg2_3.0_scaffold_2035_c_26
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(21225..21854)
DNA (630bp) protein (210aa)
uracil DNA glycosylase superfamily, DNA polymerase bacteriophage-type; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=CG_Berkel_01
uracil DNA glycosylase superfamily, DNA polymerase bacteriophage-type (EC:2.7.7.7)
Uracil DNA glycosylase superfamily, DNA polymerase bacteriophage-type n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QB61_9CHLR
cg2_3.0_scaffold_2035_c_27
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(22036..22821)
DNA (786bp) protein (262aa)
Enoyl-[acyl-carrier-protein] reductase (NADH) (EC:1.3.1.9) Tax=CG_Berkel_01
Enoyl-[acyl-carrier-protein] reductase (NADH) (EC:1.3.1.9)
enoyl-ACP reductase n=1 Tax=Leucothrix mucor RepID=UPI0003B426F2
cg2_3.0_scaffold_2035_c_28
CG_Berkel_01, Berkelbacteria, Bacteria

Not on your lists

comp(22987..25119)
DNA (2133bp) protein (711aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=CG_Berkel_01
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase id=4029024 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
cg2_3.0_scaffold_2035_c_29
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

Not on your lists


comp(25272..25592)
DNA (321bp) protein (107aa)
30S ribosomal protein S15 {ECO:0000313|EMBL:KKQ88049.1}; TaxID=1618334 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_38_9.;"
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=15189154 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
30S ribosomal protein S15
Displaying items 1-30 of 32 in total

View Taxonomy