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cg2_3.0_scaffold_7237_c

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_7237_c_1
GWE2_OD1_40_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(1..168)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR37506.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
cg2_3.0_scaffold_7237_c_trna_1
unknown

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comp(393..465)
DNA (73bp)
transferRNA
cg2_3.0_scaffold_7237_c_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

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comp(543..1685)
DNA (1143bp) protein (381aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=CG_Nomura_04
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] id=5803116 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
pgk; phosphoglycerate kinase (EC:2.7.2.3)
cg2_3.0_scaffold_7237_c_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1709..2470)
DNA (762bp) protein (254aa)
tpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=CG_Nomura_04
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=5803118 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tpiA; triosephosphate isomerase
cg2_3.0_scaffold_7237_c_4
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

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comp(2550..4364)
DNA (1815bp) protein (605aa)
S-layer domain protein Tax=CG_Nomura_04
S-layer domain protein id=2824651 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cg2_3.0_scaffold_7237_c_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

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comp(4386..4904)
DNA (519bp) protein (173aa)
seg Tax=CG_Nomura_04
seg id=5803120 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_7237_c_6
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

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comp(4909..5409)
DNA (501bp) protein (167aa)
seg Tax=CG_Nomura_04
seg id=5803121 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_7237_c_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5430..5900)
DNA (471bp) protein (157aa)
transmembrane_regions Tax=CG_Nomura_04
transmembrane_regions id=5227505 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_7237_c_8
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5904..7118)
DNA (1215bp) protein (405aa)
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=CG_Nomura_04
type IV pilin; K02653 type IV pilus assembly protein PilC id=5227504 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
type II secretion system protein
cg2_3.0_scaffold_7237_c_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7137..8900)
DNA (1764bp) protein (588aa)
Type II secretion system protein E Tax=CG_Nomura_04
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB id=5803124 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
secretion system protein E
cg2_3.0_scaffold_7237_c_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8983..9399)
DNA (417bp) protein (139aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_7237_c_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9633..9761)
DNA (129bp) protein (43aa)
Tax=CG_Nomura_04
Displaying 12 items

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