ggKbase home page

cg2_3.0_scaffold_2966_c

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2966_c_1
R_OD1_Nomurabacteria_38_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2..253
DNA (252bp) protein (84aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_38_19_curated
cg2_3.0_scaffold_2966_c_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(268..1929)
DNA (1662bp) protein (554aa)
hypothetical protein Tax=CG_Nomura_04
AAA ATPase id=3012807 bin=GWC1_OD1_38_17 species=Weeksella virosa genus=Weeksella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
cg2_3.0_scaffold_2966_c_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2100..2282)
DNA (183bp) protein (61aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_4
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2297..3199)
DNA (903bp) protein (301aa)
peptidase M14 carboxypeptidase A Tax=CG_Nomura_04
peptidase M14, carboxypeptidase A id=5803628 bin=OD1_GWC2_34_28 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M14 carboxypeptidase A
cg2_3.0_scaffold_2966_c_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3206..4141)
DNA (936bp) protein (312aa)
peptidase M14 carboxypeptidase A Tax=CG_Nomura_04
peptidase M14 carboxypeptidase A id=5803627 bin=OD1_GWC2_34_28 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M14 carboxypeptidase A
cg2_3.0_scaffold_2966_c_6
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4185..4586)
DNA (402bp) protein (134aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5002..5724)
DNA (723bp) protein (241aa)
hypothetical protein; K08982 putative membrane protein Tax=CG_Nomura_04
Putative uncharacterized protein id=3594573 bin=GWA1_ZB2_49_26 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
cg2_3.0_scaffold_2966_c_8
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5748..6080
DNA (333bp) protein (111aa)
hypothetical protein Tax=CG_Nomura_04
Putative uncharacterized protein id=4684689 bin=GWC2_TM7_48_9 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
hypothetical protein
cg2_3.0_scaffold_2966_c_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6082..6924
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00037C0FE3
rhodanese domain-containing protein Tax=CG_Nomura_04
Rhodanese domain-containing protein
cg2_3.0_scaffold_2966_c_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6949..7431
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003609104
hypothetical protein Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7464..7886
DNA (423bp) protein (141aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_12
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8116..10122
DNA (2007bp) protein (669aa)
hypothetical protein ; K01392 thimet oligopeptidase [EC:3.4.24.15] Tax=CG_Nomura_04
Zn-dependent oligopeptidase (EC:3.4.24.15); K01392 thimet oligopeptidase [EC:3.4.24.15] id=15190073 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Zn-dependent oligopeptidase (EC:3.4.24.15)
cg2_3.0_scaffold_2966_c_13
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10180..10323)
DNA (144bp) protein (48aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_14
unknown

Not on your lists

10487..10621
DNA (135bp) protein (45aa)

This feature has no annotations

cg2_3.0_scaffold_2966_c_15
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10768..12354
DNA (1587bp) protein (529aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00037D110B
leuA; 2-isopropylmalate synthase Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_16
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12259..12450)
DNA (192bp) protein (64aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_17
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12536..13051
DNA (516bp) protein (172aa)
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=4 Tax=Bacteroides RepID=D6CZK1_9BACE
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 Tax=CG_Nomura_04
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
cg2_3.0_scaffold_2966_c_18
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13041..14441
DNA (1401bp) protein (467aa)
Marine sediment metagenome DNA, contig: S06H3_L00793 Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_19
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14627..15592)
DNA (966bp) protein (322aa)
ddlA; protein DdlA (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=CG_Nomura_04
ddlA; protein DdlA (EC:6.3.2.4)
D-alanine-D-alanine ligase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYC7_9BACT
cg2_3.0_scaffold_2966_c_trna_1
unknown

Not on your lists

15682..15763
DNA (82bp)
transferRNA
cg2_3.0_scaffold_2966_c_20
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15892..16122
DNA (231bp) protein (77aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_21
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16261..16572
DNA (312bp) protein (104aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_2966_c_22

Not on your lists

comp(16544..16810)
DNA (267bp) protein (89aa)
Transposase n=1 Tax=sediment metagenome RepID=D9PIZ7_9ZZZZ
Transposase {ECO:0000313|EMBL:EFK96476.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Displaying 23 items

View Taxonomy