ggKbase home page

cg2_3.0_scaffold_449_c

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_449_c_1
GWA1_OD1_47_8, Parcubacteria, Bacteria

Not on your lists

comp(3..224)
DNA (222bp) protein (74aa)
Transposase n=1 Tax=sediment metagenome RepID=D9PIZ7_9ZZZZ
Transposase Tax=GWA1_OD1_47_8
cg2_3.0_scaffold_449_c_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(440..1087)
DNA (648bp) protein (216aa)
prx-1; peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=CG_Nomura_04
prx-1; peroxiredoxin (EC:1.11.1.15)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ16_9BACT
cg2_3.0_scaffold_449_c_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1124..2077
DNA (954bp) protein (318aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=CG_Nomura_04
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=5803396 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
cg2_3.0_scaffold_449_c_4
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2105..2266
DNA (162bp) protein (54aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_449_c_trna_1
unknown

Not on your lists

comp(2293..2363)
DNA (71bp)
transferRNA
cg2_3.0_scaffold_449_c_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2647..3801)
DNA (1155bp) protein (385aa)
Alr; alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=CG_Nomura_04
Alanine racemase id=8267239 bin=CD_OP8_4m species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Alr; alanine racemase
cg2_3.0_scaffold_449_c_6
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(4111..5541)
DNA (1431bp) protein (477aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Nomura_04
aspS; aspartyl-tRNA synthase (EC:6.1.1.12)
Aspartyl-tRNA synthetase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX79_9BACT
cg2_3.0_scaffold_449_c_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5546..5755)
DNA (210bp) protein (70aa)
XRE family transcriptional regulator Tax=CG_Nomura_04
Transcriptional regulator, XRE family id=1955614 bin=GWE2_Bacteroidetes_41_25 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
XRE family transcriptional regulator
cg2_3.0_scaffold_449_c_8
unknown

Not on your lists

5822..6037
DNA (216bp) protein (72aa)

This feature has no annotations

cg2_3.0_scaffold_449_c_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6508..7689)
DNA (1182bp) protein (394aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_449_c_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8057..9304)
DNA (1248bp) protein (416aa)
Putative glycin-rich signal peptide protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P8Z2_9BURK
hypothetical protein Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_449_c_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9301..9945)
DNA (645bp) protein (215aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_449_c_12
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10739..11308
DNA (570bp) protein (190aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_449_c_13
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11369..12613)
DNA (1245bp) protein (415aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Nomura_04
Putative ABC transporter permease protein id=3309813 bin=GWA1_ZB2_49_26 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
cg2_3.0_scaffold_449_c_14
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12615..13334)
DNA (720bp) protein (240aa)
ABC transporter related protein Tax=CG_Nomura_04
Macrolide export ATP-binding/permease protein MacB id=3736880 bin=GWC2_OD1_43_27 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ABC transporter related protein
cg2_3.0_scaffold_449_c_15
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13348..14898)
DNA (1551bp) protein (517aa)
RND family efflux transporter, MFP subunit Tax=CG_Nomura_04
RND family efflux transporter MFP subunit id=5803398 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RND family efflux transporter, MFP subunit
cg2_3.0_scaffold_449_c_16
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14952..15746)
DNA (795bp) protein (265aa)
DsbA family oxidoreductase Tax=CG_Nomura_04
DSBA oxidoreductase id=5803654 bin=OD1_GWC2_34_28 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sodium/proton antiporter
cg2_3.0_scaffold_449_c_17
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15838..16035
DNA (198bp) protein (66aa)
hypothetical protein Tax=CG_Nomura_04
hypothetical protein id=5801751 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
cg2_3.0_scaffold_449_c_18
unknown

Not on your lists

16185..16391
DNA (207bp) protein (69aa)

This feature has no annotations

cg2_3.0_scaffold_449_c_19
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16388..16867)
DNA (480bp) protein (160aa)
bacterioferritin comigratory protein BCP; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=CG_Nomura_04
bacterioferritin comigratory protein, thiol peroxidase, putative; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] id=13473 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
peroxiredoxin
cg2_3.0_scaffold_449_c_20
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16864..17313)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037ED942
hypothetical protein Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_449_c_21
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17335..17910)
DNA (576bp) protein (192aa)
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein Tax=CG_Nomura_04
engB, yihA, ysxC; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein id=17164 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
engB; ribosome biogenesis GTP-binding protein YsxC
cg2_3.0_scaffold_449_c_22
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17907..18191)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EPQ8_9BACT
dTDP-4-keto-l-rhamnose reductase related Tax=CG_Nomura_04
dTDP-4-keto-l-rhamnose reductase related
cg2_3.0_scaffold_449_c_23
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18203..18940)
DNA (738bp) protein (246aa)
Vegetative protein 296 n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QH37_9BACI
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=CG_Nomura_04
FeS assembly ATPase SufC
cg2_3.0_scaffold_449_c_24
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18927..19310)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A1W2_9BACT
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=CG_Nomura_04
NifU family SUF system FeS assembly protein
cg2_3.0_scaffold_449_c_25
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19312..20541)
DNA (1230bp) protein (410aa)
selenocysteine lyase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=CG_Nomura_04
cysteine desulfurase n=1 Tax=Bacillus acidiproducens RepID=UPI00036BCE60
cysteine desulfurase
cg2_3.0_scaffold_449_c_26
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20551..21912)
DNA (1362bp) protein (454aa)
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB Tax=CG_Nomura_04
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=5048371 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
FeS assembly protein SufB
cg2_3.0_scaffold_449_c_27
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22310..23668)
DNA (1359bp) protein (453aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=CG_Nomura_04
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=5803390 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RpoD subfamily RNA polymerase sigma-70 subunit
cg2_3.0_scaffold_449_c_28
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23723..25459)
DNA (1737bp) protein (579aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=CG_Nomura_04
dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-] id=5803389 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA primase
cg2_3.0_scaffold_449_c_29
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(25561..29202)
DNA (3642bp) protein (1214aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=CG_Nomura_04
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5803388 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
Displaying items 1-30 of 42 in total

View Taxonomy