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cg2_3.0_scaffold_1816_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1816_c_1
GWA1_OD1_47_8, Parcubacteria, Bacteria

Not on your lists

comp(3..251)
DNA (249bp) protein (83aa)
Transposase n=1 Tax=sediment metagenome RepID=D9PIZ7_9ZZZZ
Transposase Tax=GWA1_OD1_47_8
cg2_3.0_scaffold_1816_c_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


343..2811
DNA (2469bp) protein (823aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5803528 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gyrA; DNA gyrase, A subunit (EC:5.99.1.3)
DNA gyrase subunit A Tax=CG_Nomura_04
cg2_3.0_scaffold_1816_c_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2862..3395
DNA (534bp) protein (178aa)
hypothetical protein; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=CG_Nomura_04
type 11 methyltransferase id=5803526 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg2_3.0_scaffold_1816_c_4
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3427..4749
DNA (1323bp) protein (441aa)
transmembrane_regions Tax=CG_Nomura_04
transmembrane_regions id=5803525 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1816_c_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4772..5146
DNA (375bp) protein (125aa)
Putative uncharacterized protein Tax=CG_Nomura_04
Putative uncharacterized protein id=5227148 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_1816_c_6
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5191..5568
DNA (378bp) protein (126aa)
hypothetical protein Tax=CG_Nomura_04
Uncharacterized protein id=5227147 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
cg2_3.0_scaffold_1816_c_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5592..5975
DNA (384bp) protein (128aa)
seg Tax=CG_Nomura_04
seg id=5803456 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1816_c_8
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6111..6497
DNA (387bp) protein (129aa)
transmembrane_regions Tax=CG_Nomura_04
transmembrane_regions id=5227146 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_1816_c_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6634..7020
DNA (387bp) protein (129aa)
transmembrane_regions Tax=CG_Nomura_04
transmembrane_regions id=5803457 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1816_c_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7032..7331
DNA (300bp) protein (100aa)
transmembrane_regions Tax=CG_Nomura_04
transmembrane_regions id=5227144 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_1816_c_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7579..8742)
DNA (1164bp) protein (388aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1816_c_12
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8739..9878)
DNA (1140bp) protein (380aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1816_c_trna_4
unknown

Not on your lists

comp(10057..10140)
DNA (84bp)
transferRNA
cg2_3.0_scaffold_1816_c_13
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10231..10716)
DNA (486bp) protein (162aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1816_c_14
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10780..11193
DNA (414bp) protein (138aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1816_c_15
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11491..11997
DNA (507bp) protein (169aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1816_c_16
unknown

Not on your lists

comp(12247..12417)
DNA (171bp) protein (57aa)

This feature has no annotations

cg2_3.0_scaffold_1816_c_trna_3
unknown

Not on your lists

comp(12385..12467)
DNA (83bp)
transferRNA
cg2_3.0_scaffold_1816_c_17
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12522..12686)
DNA (165bp) protein (55aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1816_c_18
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12967..15693)
DNA (2727bp) protein (909aa)
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=CG_Nomura_04
id=5227216 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ATP-dependent chaperone ClpB
cg2_3.0_scaffold_1816_c_19
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15808..16704)
DNA (897bp) protein (299aa)
Putative uncharacterized protein Tax=CG_Nomura_04
Putative uncharacterized protein id=5803368 bin=OD1_GWC2_34_28 species=uncultured bacterium CSLC2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1816_c_20
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16793..17365)
DNA (573bp) protein (191aa)
Superoxide dismutase (EC:1.15.1.1) Tax=CG_Nomura_04
superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] id=5050389 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Superoxide dismutase (EC:1.15.1.1)
cg2_3.0_scaffold_1816_c_21
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17396..18643)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWF8_9BACT
cysteine desulfurase NifS Tax=CG_Nomura_04
cysteine desulfurase NifS
cg2_3.0_scaffold_1816_c_22
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18779..19237
DNA (459bp) protein (153aa)
hypothetical protein Tax=CG_Nomura_04
hypothetical protein id=5803476 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg2_3.0_scaffold_1816_c_23
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19288..20811
DNA (1524bp) protein (508aa)
translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=CG_Nomura_04
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=5803475 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
translation initiation factor IF-2
cg2_3.0_scaffold_1816_c_24
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20808..21131
DNA (324bp) protein (108aa)
Ribosome-binding factor A Tax=CG_Nomura_04
Ribosome-binding factor A id=5803474 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1816_c_trna_1
unknown

Not on your lists

21169..21240
DNA (72bp)
transferRNA
cg2_3.0_scaffold_1816_c_trna_2
unknown

Not on your lists

21280..21361
DNA (82bp)
transferRNA
cg2_3.0_scaffold_1816_c_25
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21313..21747)
DNA (435bp) protein (145aa)
recombinase Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Recombinase id=3633162 bin=GWB1_Berkelbacteria_38_5 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
Displaying 29 items

View Taxonomy